Gene Synpcc7942_1773 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1773 
Symbol 
ID3774348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1839008 
End bp1839325 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content58% 
IMG OID637800214 
Producthypothetical protein 
Protein accessionYP_400790 
Protein GI81300582 
COG category[R] General function prediction only 
COG ID[COG1837] Predicted RNA-binding protein (contains KH domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCTCAGG CTCCTGCTGA TCGACCCGAC TATGTTGGGC TCGTTCGCCA TTTGCTCCAG 
CCCCTGTTAG AACCGGGTGA GTCGCTACGT TTAGATAGCG AGACCACGCA AGCCGGTCGA
CGGGTTCTTT TGCGTTTGGC GGCAGAAGAT GCTGCCATGC CTCGTATTTT GGGGCGAGGA
GGGCGGAACC TTCAGGCGGT GCGTGCCATC CTCAATGCCG CAGCGGAGCT AGCAGGTCAG
CAAATCCATT TGGAAGTTTT GGGGCAAGCA CGCCACACAG AACGACCGCA GCGCCGAGAC
CGCAATCCGG TAGAATAA
 
Protein sequence
MSQAPADRPD YVGLVRHLLQ PLLEPGESLR LDSETTQAGR RVLLRLAAED AAMPRILGRG 
GRNLQAVRAI LNAAAELAGQ QIHLEVLGQA RHTERPQRRD RNPVE