Gene Synpcc7942_1727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1727 
Symbol 
ID3775427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1799638 
End bp1800219 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content57% 
IMG OID637800166 
ProductBioY protein 
Protein accessionYP_400744 
Protein GI81300536 
COG category[R] General function prediction only 
COG ID[COG1268] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCGCTAA CGGGATTGCT CTGGGCCGGA ATTGGATTGC TCCTGACGAT CGCAGGAACT 
TTTATTGAAC CGGCAATTTT GGTGCCGAGC TGGCAAGAAG GGAGTCTACG GTGGTTGACC
TATTCGTTAA CCAGCTCAGC CCAAGTGGCA GCAATGCTGT TCACGAGCTG CATGGGCGGC
GCCGAAGCTA GTTTTCTAGC CCAGGTTGCT TATCTGGCCC TCGGCTTGAG CCGCTATCCC
GTTTTTAGCC AAGGTGGCGG GCTCGGCTAT TGGCAAGAGC CGGGCTTTGG CTTTTTGATT
GGTTTCTTAC CAGCCGCTTG GCTCTGCGGC CGTTGGGCGT TTCGGCAACC TGTCACGCTG
GAGCATCTCA GCTTAGGTTG CCTGCTGGGT CTGGCGACGG TCCAGTTTTT TGGGGCTATC
TATCTGGGGC TACTGACCTT AGGCGGTGGC TTACATGGCG GGGCCACAGC TTTGCCAGGT
TTGCTCTGGC AGTACAACAT TTGGCCCCTC TCGGGACAGT TGGCGCTTGT CTGTGGTGTC
ACCCTGATCG CCTTTCTGTT GCGACGGCTT CTGCTCTACT AG
 
Protein sequence
MSLTGLLWAG IGLLLTIAGT FIEPAILVPS WQEGSLRWLT YSLTSSAQVA AMLFTSCMGG 
AEASFLAQVA YLALGLSRYP VFSQGGGLGY WQEPGFGFLI GFLPAAWLCG RWAFRQPVTL
EHLSLGCLLG LATVQFFGAI YLGLLTLGGG LHGGATALPG LLWQYNIWPL SGQLALVCGV
TLIAFLLRRL LLY