| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1715 |
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| Symbol | upp |
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| ID | 3775414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 1783250 |
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| End bp | 1783903 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637800153 |
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| Product | uracil phosphoribosyltransferase |
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| Protein accession | YP_400732 |
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| Protein GI | 81300524 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0035] Uracil phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01091] uracil phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTCCTC AACTGCGTAT CTTCGTGCCG CCCCATCCCT TAATTCGGCA CTGGCTGGGC
ATTGCCCGCG ATCGCCAGAC GCCGACGCCT CTGTTTCGCA CCGCGATCGC AGAGCTGGGC
CGCTGGCTCG CCTATGAGGC TGTGCGGGAA TGGCTACCAA CGATTCCAGC GGCGGTGCAA
ACTCCTCTTG CAGAAACCCC AGCGGAGTTC GTCGATTTTT CGCAACCCTT GGCGATCGTG
CCGATTCTGC GCGCAGGTCT GGGTTTAGTG GAGTCTGTCC AACAGGTTTT GCCGACTGCC
CGCATTTTTC ACGTGGGTCT CAAGCGGGAT GAAGTCAGTC TTGAACCGCG CTGCTACCTC
AATCACCTGC CAGAGCAACT TGAAGTGAAC AGTCGCGTTC TGGTTCTCGA CCCGATGCTG
GCGACAGGTG GCTCGCTGCT CTATACCCTT GATTTGCTGC GCGATCGCGG TGTCTCTGCT
GAGCAAGTGC GGGTGCTTTC AATTGTGGCT GCCCCGCCAG CGCTACAAAA ACTCAGTCAA
GCCTACCCGG CGTTGACGAT TTACAGCGCC ATCATTGATG AGCAGCTGAA CGACAAAGGC
TTTATCGTGC CGGGGCTGGG GGATGCTGGC GATCGCCTGT TTGGTACTCC TTGA
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| Protein sequence | MAPQLRIFVP PHPLIRHWLG IARDRQTPTP LFRTAIAELG RWLAYEAVRE WLPTIPAAVQ
TPLAETPAEF VDFSQPLAIV PILRAGLGLV ESVQQVLPTA RIFHVGLKRD EVSLEPRCYL
NHLPEQLEVN SRVLVLDPML ATGGSLLYTL DLLRDRGVSA EQVRVLSIVA APPALQKLSQ
AYPALTIYSA IIDEQLNDKG FIVPGLGDAG DRLFGTP
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