| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1706 |
|---|
| Symbol | |
|---|
| ID | 3775405 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | + |
|---|
| Start bp | 1773234 |
|---|
| End bp | 1775426 |
|---|
| Gene Length | 2193 bp |
|---|
| Protein Length | 730 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637800144 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_400723 |
|---|
| Protein GI | 81300515 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.533285 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGACA GTTTGCCCCC CACTCCGGTT ATTGCCGAGG TAGCAGCCCC CGCTGAGGTT
GTGGAGCCGG CGATCGCTCA AGCTCCGGCC ACCGCCAGTC CTGCCGCGCC AGGCTCTGTT
CTCCCCCCCT CTTCAGAAGC TAGTCCTAGT CCTCCCCCTG CTCGACCCAG ACTGCGACGA
CCCACTCCAG CACCAGCAGT CAGTCCGCTA GAACCCGCCA CAACCCCAAC AACTGCACCC
CCACCGACTG CCGAAACAAC CCCGGCGCTG CCCAACCTAG AATCCATGGG GATTGTGCGG
TTGCAGGCGG ATCGCCAAAG CTTTGATGGC GAACGCCAAT TGGTGATTGC CAAAGGTCGG
GCATCCCTGC GCTTTCGCGG TGGCGTCCTG TTTGCTGACG AAATTCAAGT CAACCTGCAG
GCCAACACCC TCAAGGCTGA GGGGCGGGTT TGGTTACTGC GGGGGCAGCA GGTGGCACGG
GGCAGCCAGC TTACCTACAA CCTGCTCCAA GAGACAGGAA CCTTACTCAA TGCGCAAGGG
CGATTTAACA CAGGCCCTAC CGGTGAGCGC GATCTCGATC CCTCTATTCC ACCCAGCACG
GATATTGCCG ATCGCATCCA ATCGGTTGAA GAACTTGAGC AGCCGGTCAC GAATGTGCGT
CGCATTGGCC AACTGCTGGT CACCTCTGCC TTTGGCGGGG AATACACCGA CCCCAGCGAC
CTCCAGAGCT TGACCAATCC TGGGGCCGTC CTACCCACCC AGATTAGTGG CTTCGATATT
CGCGGTGGCG TCCAGAATGT CCGTTTTCAG GCCGATCGTC TTGACCTGCG TCCCGATGGC
TGGACAGCCC AAGATATTGC CCTGACCAAT GATCCATTTG CACCACCCCA GGCCGAGATT
CGCTCTGCTC AAGCCACCTA TCAAGCGCCA CCCAATGGCC TCGGCAGTCT GGGTATTTTC
GGTTCCGGTT TAGTCCTAGA AAATAGCCTC CGCATTCCAC TGCCGGATAA CAACAGCGTG
GTGCAGGAGC GAGAAGGGGG AATTCTCACC ATTGGCTTTG ATGGCGTCGA TCGCAACGGG
GCCTTTCTAG AACGAGAGTT CTCGGTGATT AACGAGAATA ATCTGCAGCT CTCTCTCACG
CCCCAGTTTT TGGTGCAGCG GGCGATTAAC CTAGCAGGGG GAGGCCGCGA ACTAGGCAAC
GATGTGGAAG TCAACTCGGT CAATCCCCTC GATGCCTTTG GCTTGGTGGG GCGCTTGAAT
GCCAACTTGG CTCCCAATAC CCAGTTCAGC TTGATCACTA ATCTCGCCAG CCTTAATCCC
GAGAACCTCA GCACCCAAAG CCGGATTAGC TCTGACTTGC GGCAGGACTT TGGCTTCTTT
GATATCTTGC TCAACTATCG CTATCGTGAA CGCCGCTTTA ATGGATCCTT AGGGGTGCAA
ACCGTTCAGC AGAGCTATGG CCTCACTCTA GAGACCCGTC GACTCGATTT GCTCGCCCTC
GCTGGCGTCA GTCCTAGTAC CACCTTCCCT CGCATTGACG GACTCAATTT CCGGTTCCAA
GCCAGTTATC AAAATCTACT TGCTCTGACT GATCAGCCCA ACCTCATCGG CACGCAACCC
TCACCGGCCC TGGCAAACCT TAATCGTTTT CAGCTCGAGA CGGGTTTAGC GTTGCCCATT
ACGCTGTGGC GCGAAGAGGC CCTGCCAGCA ACCCCCGATG CGGGCCTACG CTACACGTCT
GCGCCGGTTT CGCCAGGATT ACGCATCGTT CCCGAAATTA CGGGGGTTAT TTCGAATTAC
AGCGATGGTA CTAGTCAAAA CTCGATCGCT TATCGATTCG GGGCAGATTT AACCCTGGGT
AAATTTGCCG GGGACTTCTT TGACTACACC AATCTTCGCG TTGATTATCT GCGATCGACC
GGCGAAGGCT TCTCACCCTT CCTCTTCGAT CGCCTCGTCG ATCGCAATGT TTTAGTGTTA
GGGGCTACCC AACAGCTCTT TGGTCCCTTC TTGGTTGGGG TCACTAGTGC GATCAACCTC
GATACCAACC AAGCCTTCAA CACTACCTAT CGATTGGAAT ATAGTCGCCG TGCCTTTGGC
GTCTCTTTGA GCTACAACCC CGATCAACAA GTAGGAATTT TGGCAATTCA ACTCAATGAT
TTTGATTGGC AGGGTCTGGG AGGAGGAAAC TAG
|
|---|
| Protein sequence | MLDSLPPTPV IAEVAAPAEV VEPAIAQAPA TASPAAPGSV LPPSSEASPS PPPARPRLRR
PTPAPAVSPL EPATTPTTAP PPTAETTPAL PNLESMGIVR LQADRQSFDG ERQLVIAKGR
ASLRFRGGVL FADEIQVNLQ ANTLKAEGRV WLLRGQQVAR GSQLTYNLLQ ETGTLLNAQG
RFNTGPTGER DLDPSIPPST DIADRIQSVE ELEQPVTNVR RIGQLLVTSA FGGEYTDPSD
LQSLTNPGAV LPTQISGFDI RGGVQNVRFQ ADRLDLRPDG WTAQDIALTN DPFAPPQAEI
RSAQATYQAP PNGLGSLGIF GSGLVLENSL RIPLPDNNSV VQEREGGILT IGFDGVDRNG
AFLEREFSVI NENNLQLSLT PQFLVQRAIN LAGGGRELGN DVEVNSVNPL DAFGLVGRLN
ANLAPNTQFS LITNLASLNP ENLSTQSRIS SDLRQDFGFF DILLNYRYRE RRFNGSLGVQ
TVQQSYGLTL ETRRLDLLAL AGVSPSTTFP RIDGLNFRFQ ASYQNLLALT DQPNLIGTQP
SPALANLNRF QLETGLALPI TLWREEALPA TPDAGLRYTS APVSPGLRIV PEITGVISNY
SDGTSQNSIA YRFGADLTLG KFAGDFFDYT NLRVDYLRST GEGFSPFLFD RLVDRNVLVL
GATQQLFGPF LVGVTSAINL DTNQAFNTTY RLEYSRRAFG VSLSYNPDQQ VGILAIQLND
FDWQGLGGGN
|
|---|
| |