Gene Synpcc7942_1638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1638 
Symbol 
ID3775708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1706685 
End bp1706951 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content58% 
IMG OID637800075 
Producthypothetical protein 
Protein accessionYP_400655 
Protein GI81300447 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.634391 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACATCC TTGAGATTTC CCTGAAGTTC ACGCCCATGC CGGTTTCGGT GCAGCGCAAA 
GAAGCAGAAG CTGCACAGGC GGCCTATCAG CAAGTGGTTG AGGCCTTGCG CAGCGGCCAG
CCAAGCGTAT TGGAGCTGCA CTGCGAGTTC CAGGCTGAGA AGAAGCTGGC AGTGCTCACC
AGCGAGATCG CCTCGGTCCA GCTCTACGAG AAGTCGGGCG GTAGTGCCAC GGTCAAGCGT
CCTGGCTTTG CTGTGATTGG CGAATAA
 
Protein sequence
MYILEISLKF TPMPVSVQRK EAEAAQAAYQ QVVEALRSGQ PSVLELHCEF QAEKKLAVLT 
SEIASVQLYE KSGGSATVKR PGFAVIGE