Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1579 |
Symbol | |
ID | 3775003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1643490 |
End bp | 1643957 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637800012 |
Product | dual specificity protein phosphatase |
Protein accession | YP_400596 |
Protein GI | 81300388 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2453] Predicted protein-tyrosine phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCTCG CTCCAGGACG TAAAAGTCAG GGTCTCATCG GTCAGTGGGA TCGTGATTTG ATCACGGATC TCGAACGTCT CAAGCATCAC TATCACTGCG ATCGCCTCGT TTCCCTCATT GAAGACCACG AACTTGTAGC GATAGGAATT CCTACACTCT ACGAAGCAGT CCGGCAGCAG GGGATTGCGC TCTCACGTCT AGCCATTGTC GATGGCGGAA CACCGACTGA CTTAGAGACT TATCAATTAC TCATTACAGA TTTAATTCAA GCGCTATCTG CGAGGGAAAC GATTGTCATT CACTGTCATG CAGGTCTGGG GCGTACGGGT ATGTTGGCTG CATCTATTCT AGTCACCAAA GGACAACCCC CTGAAGCCGC GATCGCAGCC GTACGAGCAC TTCGTCCACG AGCGATCGAA ACTCATGCTC AAGAACAAAT CATTTACAAA ATTGCAGCGA AAATCTAG
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Protein sequence | MTLAPGRKSQ GLIGQWDRDL ITDLERLKHH YHCDRLVSLI EDHELVAIGI PTLYEAVRQQ GIALSRLAIV DGGTPTDLET YQLLITDLIQ ALSARETIVI HCHAGLGRTG MLAASILVTK GQPPEAAIAA VRALRPRAIE THAQEQIIYK IAAKI
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