Gene Synpcc7942_1579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1579 
Symbol 
ID3775003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1643490 
End bp1643957 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content50% 
IMG OID637800012 
Productdual specificity protein phosphatase 
Protein accessionYP_400596 
Protein GI81300388 
COG category[T] Signal transduction mechanisms 
COG ID[COG2453] Predicted protein-tyrosine phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTCG CTCCAGGACG TAAAAGTCAG GGTCTCATCG GTCAGTGGGA TCGTGATTTG 
ATCACGGATC TCGAACGTCT CAAGCATCAC TATCACTGCG ATCGCCTCGT TTCCCTCATT
GAAGACCACG AACTTGTAGC GATAGGAATT CCTACACTCT ACGAAGCAGT CCGGCAGCAG
GGGATTGCGC TCTCACGTCT AGCCATTGTC GATGGCGGAA CACCGACTGA CTTAGAGACT
TATCAATTAC TCATTACAGA TTTAATTCAA GCGCTATCTG CGAGGGAAAC GATTGTCATT
CACTGTCATG CAGGTCTGGG GCGTACGGGT ATGTTGGCTG CATCTATTCT AGTCACCAAA
GGACAACCCC CTGAAGCCGC GATCGCAGCC GTACGAGCAC TTCGTCCACG AGCGATCGAA
ACTCATGCTC AAGAACAAAT CATTTACAAA ATTGCAGCGA AAATCTAG
 
Protein sequence
MTLAPGRKSQ GLIGQWDRDL ITDLERLKHH YHCDRLVSLI EDHELVAIGI PTLYEAVRQQ 
GIALSRLAIV DGGTPTDLET YQLLITDLIQ ALSARETIVI HCHAGLGRTG MLAASILVTK
GQPPEAAIAA VRALRPRAIE THAQEQIIYK IAAKI