| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1572 |
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| Symbol | |
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| ID | 3774996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 1631339 |
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| End bp | 1632925 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637800005 |
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| Product | dehydrogenase subunit-like protein |
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| Protein accession | YP_400589 |
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| Protein GI | 81300381 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.849895 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.707104 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTATCA ATCAAACTGA CTACGACATT GTCATCATTG GCACTGGGGC TGGAGGAGGA
ACGCTACTCC ATCGCCTTGC TCCAAGCGGC AAGAAGATTC TGATTCTTGA GCAAGGGCCT
TATCTTCCCC GTGAAAAGGA AAACTGGAGC GCGACTGAGG TCTACGGCAA GGAGCGCTAC
CACACCCATG ATCAGTGGTA CGACAAACAG GGAACAGCCT TTCGACCCCA GATGAGCTAC
TGGGTAGGAG GCAACACCAA AGTTTATGGG GCTGCTTTGC TCCGTCTGCG GGAGCGCGAC
TTTGAAGCCG TTCAACATCG GGATGGGATC TCGCCCGAGT GGCCACTAAA ATACGCAGAC
TTTGAGCCTT ACTACAGTCA AGCTGAAGCC CTATTTGATG TTCACGGCGA GGATGGCAAC
GATCCCACCG CCCCACCGCG CCAAACTCCT TACCCCTATC CGGCAGTCAG TCATGAACCC
CGCATGCAGG AGATCTATGA CGGGCTGAAA GGACAAGGAC TGAAGCCGTT CCATTTGCCC
GTAGGTCTCA AACTTAACGA GACAGAGCGT GCCCTCTGGG ACTGCATCCG CTGCGATAGC
TGTGATGGTT TTCCCTGTTT GGTGCGGGGC AAAGCCGATA GTGAAGTTAA TGCCGTCACA
CCAGCGCTGA CTTACCCAAA CGTCACCCTC AAGACCGAGG CCAAAGTACT GCGGTTACTG
ACCAATGAAT CGGGCCGCGA GGTGACGGCA GTGGAAACCC AAATTGGTGG TGAGACTGTT
CTGTTCAAGG GCGATGTGGT GGTGGTCAGT TGTGGCGCTG CGAACTCCGC CGCTCTGCTG
CTGCGATCGG TGAGCGATCG CCATCCCAAT GGCCTAGCCA ACAGTTCCGA TCAGGTCGGG
CGCAACTTCA TGAAGCACTT GACGACGGCG ATGGTGGCAC TTAACGCCAA GAAAAATGAG
TCGGTCTACC AAAAAACGAT CGCAGTCAGC GACTTCTATT GGGGCGAAGA CGGTTACGAC
TACCCAATGG GCTTCATCCA AAATACGGGC AATGTGTTGC CCGACATGAT GCCGGCTGAA
GCGCCGGGAT TACTGGCATC ACTGCTCAAG TTCGTGCCCA GGCTGGATGT TGATTTAGGG
CCTCAATACC AGGCTGCGGC TCAGCACTCA GTGGGCTGGT GGTTCCAAAC GGAAGACCTG
CCTGATCCAA ACAATCGGGT GCGAGTCGTG AACGACCAAA TTCATTTGGA CTACACGCCA
AATAACACTG AGTCGACTCA GCGCTTGGTT CATCGCTGGA TTGACATTCT GAAAGCAGTC
GACCGTGCCG ATCACGTTCT TCCCTTTGAC CTCTATCCCC GCAGTAGTTC GCCCATTCAG
GTGTTGGGAC ACCAGTGCGG CACCTGTCGC TTTGGGGAAG ACCCGACAAC ATCAGTGCTC
GATCTCAACT GTCAGGCTCA CGATGTTGAC AACCTCTATG TGGTTGACAG CAGCTTCTTC
TGCTCCAGTG CTGCGGTCAA CCCGACCTTG ACGATCATTG CCAACGCTCT ACGGGTGGGC
GATCACCTGC TCGAGCGGCT GGGCTAG
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| Protein sequence | MAINQTDYDI VIIGTGAGGG TLLHRLAPSG KKILILEQGP YLPREKENWS ATEVYGKERY
HTHDQWYDKQ GTAFRPQMSY WVGGNTKVYG AALLRLRERD FEAVQHRDGI SPEWPLKYAD
FEPYYSQAEA LFDVHGEDGN DPTAPPRQTP YPYPAVSHEP RMQEIYDGLK GQGLKPFHLP
VGLKLNETER ALWDCIRCDS CDGFPCLVRG KADSEVNAVT PALTYPNVTL KTEAKVLRLL
TNESGREVTA VETQIGGETV LFKGDVVVVS CGAANSAALL LRSVSDRHPN GLANSSDQVG
RNFMKHLTTA MVALNAKKNE SVYQKTIAVS DFYWGEDGYD YPMGFIQNTG NVLPDMMPAE
APGLLASLLK FVPRLDVDLG PQYQAAAQHS VGWWFQTEDL PDPNNRVRVV NDQIHLDYTP
NNTESTQRLV HRWIDILKAV DRADHVLPFD LYPRSSSPIQ VLGHQCGTCR FGEDPTTSVL
DLNCQAHDVD NLYVVDSSFF CSSAAVNPTL TIIANALRVG DHLLERLG
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