Gene Synpcc7942_1569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1569 
Symbol 
ID3774993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1626654 
End bp1627115 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content61% 
IMG OID637800002 
Producthypothetical protein 
Protein accessionYP_400586 
Protein GI81300378 
COG category[S] Function unknown 
COG ID[COG4633] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.117351 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGCTC CCCCGCCTGC TGCAATCGCG GTAACCACTG GCTCGGACGC TGCACCCTTC 
CGTGCTGTCG CCCAACCTGT TTGGGCTAAA ACAACCGTCA CGGGCGCGGG TCTCGTCCTG
ATTGGCTGGG AATTGTGGTG GTTTTTGGTG CGCCGCGCCA AACCCCAGAC AGCTGCGATC
GCGGAGACAT GGCAGGAGCT GACAATTACG GTGGATGGTG GCTACCAACC CAGCCATGTG
GTCGTCCAAG CCGGTCAGCC GCTGCGACTT CATTTCGATC GCCGCGATCC CAATCACTGC
CTTGATGAGG TCCGCTTCCC CGATTTCCAG ATCGCCCAGC ACCTACCCAA TAACCAAGTC
ACTGCGATCG AATTCCTCCC CACCCAACCC GGTCGCTACG AGTTCACCTG CGGCATGGCC
ATGTTTCGTG GGGTGCTCGA AGTGCAGCCT GCCTCAGCCT AA
 
Protein sequence
MVAPPPAAIA VTTGSDAAPF RAVAQPVWAK TTVTGAGLVL IGWELWWFLV RRAKPQTAAI 
AETWQELTIT VDGGYQPSHV VVQAGQPLRL HFDRRDPNHC LDEVRFPDFQ IAQHLPNNQV
TAIEFLPTQP GRYEFTCGMA MFRGVLEVQP ASA