Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1521 |
Symbol | |
ID | 3774945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1572849 |
End bp | 1573646 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637799954 |
Product | Sec-independent protein translocase TatD |
Protein accession | YP_400538 |
Protein GI | 81300330 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0084] Mg-dependent DNase |
TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0926881 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCTCG TCGATACTCA CGTTCACCTC AATTTCGACT GCTTCGCGGC AGAACTCGAT GCCGTAGCAG ACCAATGGCG CCAAGCGGGT GTAGCTCGCT TGGTGCATTC CTGTGTCACG CCGGCGGAAT TTCCGGAACT CCAAGCCATC GCCGATCGCT TCCCGGAAGT GTCGTTGGCG GTGGGCCTGC ATCCCCTTGA TGTAGAGCTT TGGCAGGATG GCACGGCAAC TGAAATTGAA GCGTTAGCGC GGTCTGATCA ACGAGTCGTG GCGATCGGCG AAACGGGTTT GGACTTTTTC AAGTCCGAAG ACCATGTGCG TCAATACGCC GCTGTAGAAG CCCAGTTGGC GATCGCGCGA TCGCTGGATC TGCCGGTAAT TTTGCATTGC CGAGAGGCGG CTGCCGCCAT GGCGGCTGTT TTGCGATCGC AGCAGTCTCA GCCCGGTACC CTGCGAGGGG TGATGCATTG CTGGGGCGGC ACGCCGGAGG AAACCCGCTG GTTTCTCGAT CTTGGCTTCT ACGTCAGCTT CAGTGGCACC CTCACCTTTG GCAAAGCAGA GACAATTCGC GACTCTGCCC GCCTTGTCCC CAGCGATCGC CTACTGATTG AAACGGATTG CCCGTTTCTT GCGCCGGTTC CCAAACGGGG CAAGCGCAAC GAACCCGCTT TCGTCCAGCA TGTGGCGGCT CGTATGTCTG AAGTTCGCTC TGAACCCCTT GAGGCGATCG CGGCAACCAC CACCCGCAAC GCCTTCGACC TGTTCCGTTT ACCGACCGCT CTACCGCAAG TTGCTTAA
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Protein sequence | MQLVDTHVHL NFDCFAAELD AVADQWRQAG VARLVHSCVT PAEFPELQAI ADRFPEVSLA VGLHPLDVEL WQDGTATEIE ALARSDQRVV AIGETGLDFF KSEDHVRQYA AVEAQLAIAR SLDLPVILHC REAAAAMAAV LRSQQSQPGT LRGVMHCWGG TPEETRWFLD LGFYVSFSGT LTFGKAETIR DSARLVPSDR LLIETDCPFL APVPKRGKRN EPAFVQHVAA RMSEVRSEPL EAIAATTTRN AFDLFRLPTA LPQVA
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