Gene Synpcc7942_1516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1516 
Symbol 
ID3774940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1566324 
End bp1566971 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content62% 
IMG OID637799949 
Productphosphoglycerate mutase 
Protein accessionYP_400533 
Protein GI81300325 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.481804 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACTAC GGCTGATTCG CCACGCTGAG GCGATCGGGA ATGCCGAGGC ACGGATGCTG 
GGCCGCCAAG ATCAGCCGCT GACGGCTGAC GGCCTGACTC AAGCGGAGCA ACTCGGCAAA
CAGTGGCAAC AGACCTGCTG CTGGCGCCCC CAAGCCATTT GGACAAGCCC CCTCCAGCGT
GCTCAGCAAA CCGCGATCGC GCTCAGTCAG GGTCAGACGC CTGTCATTCC CCTGTTGGTG
CAGCCGGCAC TGACTGAAAT AGACTTGGGC TGCCTGACCG GACTGACCTG GCCCGAGGCT
GAACAACGCT ATCCCGATCT CTGTCAGCAA TTGCTGCGCG ATCGCCACTG GCGACCGATT
CCCGAGGCAG AGACTTTGTC GGACTGTCGA ATGCGAGCCG AGCAGGTCTG CACTCAGCTG
ATCCACACCG AGGCCGATCT TTGGGTGATT AGCCACGGCG GTTTCCTGCA GCATCTCTTG
GCTGCCCTTC TGGGCTGCGA TCGCAGTTGG GGACTGGACT GGCCACTCCT AGGGGCGATC
GACCTGAGTC TCGCCCATGA AGATTGGGAT ACCGCAGGCA GAGATCGCTG GAACACCTCG
CTCTGGCGCT GGCAGATCCT ACATTGGCCG AGCCGCTCAG CGATCTGA
 
Protein sequence
MRLRLIRHAE AIGNAEARML GRQDQPLTAD GLTQAEQLGK QWQQTCCWRP QAIWTSPLQR 
AQQTAIALSQ GQTPVIPLLV QPALTEIDLG CLTGLTWPEA EQRYPDLCQQ LLRDRHWRPI
PEAETLSDCR MRAEQVCTQL IHTEADLWVI SHGGFLQHLL AALLGCDRSW GLDWPLLGAI
DLSLAHEDWD TAGRDRWNTS LWRWQILHWP SRSAI