Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1516 |
Symbol | |
ID | 3774940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1566324 |
End bp | 1566971 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637799949 |
Product | phosphoglycerate mutase |
Protein accession | YP_400533 |
Protein GI | 81300325 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0406] Fructose-2,6-bisphosphatase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.481804 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGACTAC GGCTGATTCG CCACGCTGAG GCGATCGGGA ATGCCGAGGC ACGGATGCTG GGCCGCCAAG ATCAGCCGCT GACGGCTGAC GGCCTGACTC AAGCGGAGCA ACTCGGCAAA CAGTGGCAAC AGACCTGCTG CTGGCGCCCC CAAGCCATTT GGACAAGCCC CCTCCAGCGT GCTCAGCAAA CCGCGATCGC GCTCAGTCAG GGTCAGACGC CTGTCATTCC CCTGTTGGTG CAGCCGGCAC TGACTGAAAT AGACTTGGGC TGCCTGACCG GACTGACCTG GCCCGAGGCT GAACAACGCT ATCCCGATCT CTGTCAGCAA TTGCTGCGCG ATCGCCACTG GCGACCGATT CCCGAGGCAG AGACTTTGTC GGACTGTCGA ATGCGAGCCG AGCAGGTCTG CACTCAGCTG ATCCACACCG AGGCCGATCT TTGGGTGATT AGCCACGGCG GTTTCCTGCA GCATCTCTTG GCTGCCCTTC TGGGCTGCGA TCGCAGTTGG GGACTGGACT GGCCACTCCT AGGGGCGATC GACCTGAGTC TCGCCCATGA AGATTGGGAT ACCGCAGGCA GAGATCGCTG GAACACCTCG CTCTGGCGCT GGCAGATCCT ACATTGGCCG AGCCGCTCAG CGATCTGA
|
Protein sequence | MRLRLIRHAE AIGNAEARML GRQDQPLTAD GLTQAEQLGK QWQQTCCWRP QAIWTSPLQR AQQTAIALSQ GQTPVIPLLV QPALTEIDLG CLTGLTWPEA EQRYPDLCQQ LLRDRHWRPI PEAETLSDCR MRAEQVCTQL IHTEADLWVI SHGGFLQHLL AALLGCDRSW GLDWPLLGAI DLSLAHEDWD TAGRDRWNTS LWRWQILHWP SRSAI
|
| |