Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1468 |
Symbol | |
ID | 3773640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1521482 |
End bp | 1522141 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637799900 |
Product | putative monovalent cation/H+ antiporter subunit B |
Protein accession | YP_400485 |
Protein GI | 81300277 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2111] Multisubunit Na+/H+ antiporter, MnhB subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0920919 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.210072 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTGGA TTTACCTTGC TGCTGGTCTG CTCTTCTTTT TCAAAATTAT TCTATTGCCG AACCCAACCT CTCAGCAGTC TTTTCCGATT GTTGAATTAA TCGTTCAAGA TACTGGGGTG ATCAACGCCG TCTCAGGCGT TATTTTTCGC AATCGACTCT ACGACACTGT TTTTGAGGTC GTTGTCTTTA CAATCGCAAT TATGGGCGTT CGCTATCTTT TAGCGAACGA ACCTCTATCA ACAAAAATTG ATCAATTCAG TGACCCTCCC TCACGACTAC TTGCCCAGCT TGGCGCAACG ATCGCTGCAA TCGTCGGTAT CGAGCTAGCC ATTCGTGGTC ATCTCAGCCC AGGAGGCGGA TTTGCAGCTG GTGTCGCAGG TGGAACAGCG ATTGGTTTGA TTGCTATGAC TTCATCACCA GAGGCGATGC AAAGCATTTA TCACCGTTGG CATGCTGAAA CTTGGGAGAA AGTTACAGTC CTAATTTTTA TTGTGTTGTC AGTCTTGACA CTCTCGGGAA TTGAACTTCC CCAAGGTCAA TTGGGAGCAC CCCTTAGCGG CGGGATCATC CCTATTTTGA ATATCCTCGT AGCGATTAAA GTGGCGCTTG GTGCTTGGGC AGCTGTCCTC AGTTTTATTC GCTATCGGGG TCTACTTTGA
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Protein sequence | MKWIYLAAGL LFFFKIILLP NPTSQQSFPI VELIVQDTGV INAVSGVIFR NRLYDTVFEV VVFTIAIMGV RYLLANEPLS TKIDQFSDPP SRLLAQLGAT IAAIVGIELA IRGHLSPGGG FAAGVAGGTA IGLIAMTSSP EAMQSIYHRW HAETWEKVTV LIFIVLSVLT LSGIELPQGQ LGAPLSGGII PILNILVAIK VALGAWAAVL SFIRYRGLL
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