Gene Synpcc7942_1468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1468 
Symbol 
ID3773640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1521482 
End bp1522141 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content47% 
IMG OID637799900 
Productputative monovalent cation/H+ antiporter subunit B 
Protein accessionYP_400485 
Protein GI81300277 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2111] Multisubunit Na+/H+ antiporter, MnhB subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0920919 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.210072 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTGGA TTTACCTTGC TGCTGGTCTG CTCTTCTTTT TCAAAATTAT TCTATTGCCG 
AACCCAACCT CTCAGCAGTC TTTTCCGATT GTTGAATTAA TCGTTCAAGA TACTGGGGTG
ATCAACGCCG TCTCAGGCGT TATTTTTCGC AATCGACTCT ACGACACTGT TTTTGAGGTC
GTTGTCTTTA CAATCGCAAT TATGGGCGTT CGCTATCTTT TAGCGAACGA ACCTCTATCA
ACAAAAATTG ATCAATTCAG TGACCCTCCC TCACGACTAC TTGCCCAGCT TGGCGCAACG
ATCGCTGCAA TCGTCGGTAT CGAGCTAGCC ATTCGTGGTC ATCTCAGCCC AGGAGGCGGA
TTTGCAGCTG GTGTCGCAGG TGGAACAGCG ATTGGTTTGA TTGCTATGAC TTCATCACCA
GAGGCGATGC AAAGCATTTA TCACCGTTGG CATGCTGAAA CTTGGGAGAA AGTTACAGTC
CTAATTTTTA TTGTGTTGTC AGTCTTGACA CTCTCGGGAA TTGAACTTCC CCAAGGTCAA
TTGGGAGCAC CCCTTAGCGG CGGGATCATC CCTATTTTGA ATATCCTCGT AGCGATTAAA
GTGGCGCTTG GTGCTTGGGC AGCTGTCCTC AGTTTTATTC GCTATCGGGG TCTACTTTGA
 
Protein sequence
MKWIYLAAGL LFFFKIILLP NPTSQQSFPI VELIVQDTGV INAVSGVIFR NRLYDTVFEV 
VVFTIAIMGV RYLLANEPLS TKIDQFSDPP SRLLAQLGAT IAAIVGIELA IRGHLSPGGG
FAAGVAGGTA IGLIAMTSSP EAMQSIYHRW HAETWEKVTV LIFIVLSVLT LSGIELPQGQ
LGAPLSGGII PILNILVAIK VALGAWAAVL SFIRYRGLL