Gene Synpcc7942_1419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1419 
SymbolchlL 
ID3773591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1472585 
End bp1473445 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content49% 
IMG OID637799851 
Productprotochlorophyllide reductase iron-sulfur ATP-binding protein 
Protein accessionYP_400436 
Protein GI81300228 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1348] Nitrogenase subunit NifH (ATPase) 
TIGRFAM ID[TIGR01281] light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACTTT CGGTTTATGG CAAAGGTGGT ATCGGAAAAT CAACCACCAG TTGCAATATT 
TCTGTCGCTT TAGCCAGACG TGGTAAGAAG GTGCTGCAAA TCGGTTGTGA CCCCAAGCAC
GACAGTACGT TCACCCTGAC GGGCTTTTTA ATTCCCACCA TCATCGATAC CCTGCAAGCC
AAGGATTATC ACTACGAAGA TGTCTGGCCT GAAGATGTAA TTTATCGCGG CTATGGTGGC
GTGGACTGCG TTGAAGCGGG CGGTCCACCA GCTGGTGCAG GCTGTGGCGG TTATGTGGTT
GGCGAAACCG TCAAACTACT CAAAGAGCTC AATGCCTTTG ATGAGTACGA TGTCATTCTT
TTTGATGTTT TGGGAGATGT CGTTTGTGGT GGATTTGCGG CACCACTGAA CTATTCTGAC
TACTGCTTAA TCATCACAGA TAATGGCTTT GATGCGCTCT TCGCTGCCAA TCGGATTGCC
GCCTCAGTGC GGGAAAAAGC ACGGACGCAT ACCCTGCGAC TAGCTGGATT GATTGGCAAT
CGAACTAGTA AACGTGATCT AATCGATAAA TACATCGAAG CGGTCCCGAT GCCCGTGCTA
GAAGTTCTTC CGCTGATTGA AGATATCCGT ATTTCTCGAG TGAAAGGAAA AACTGTCTTT
GAGATGGCTG AAACTGAACC CAGCCTACTC ACAGTCTGTG ATTACTACCT GAACATTGCG
GATCAAATCC TCGCAAGACC AGAGGGCGTT GTTCCCAAGG ATGCAGCCGA TCGTGACTTG
TTCAGCTTGT TATCTGACTT CTATCTCAAT CCACCCAAAC AGACTACGGA AGCGATCGCA
CCTGAAGCGT TGCTGGTGTA G
 
Protein sequence
MKLSVYGKGG IGKSTTSCNI SVALARRGKK VLQIGCDPKH DSTFTLTGFL IPTIIDTLQA 
KDYHYEDVWP EDVIYRGYGG VDCVEAGGPP AGAGCGGYVV GETVKLLKEL NAFDEYDVIL
FDVLGDVVCG GFAAPLNYSD YCLIITDNGF DALFAANRIA ASVREKARTH TLRLAGLIGN
RTSKRDLIDK YIEAVPMPVL EVLPLIEDIR ISRVKGKTVF EMAETEPSLL TVCDYYLNIA
DQILARPEGV VPKDAADRDL FSLLSDFYLN PPKQTTEAIA PEALLV