Gene Synpcc7942_1417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1417 
Symbol 
ID3775215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1471000 
End bp1471983 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content60% 
IMG OID637799849 
Producthypothetical protein 
Protein accessionYP_400434 
Protein GI81300226 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGACATC TGTCTGGGTA TCGACTTCGG CCTGCGATCG CGCTGGGCTT CCTGACGATT 
GCGCTCCAAG CCTGTAGTGG CACGCCCTTT GGCCAGTCAC TGCAGCAGTC TTTTGAGCGA
CCGGAGAACG GAACTGGCAC TTCTGGCGCT CCTACAACGC CCCCGTCTCC GACCAATCCA
GCACCGTCAA CGCCAGCCCC AAGTCCGCCG GCCCTCAGCA GTTTCACGGA TCTGGATCAG
ATTCCTACTG CTCTCCGCAG CCAAGTGGAG GAGATGATCG AACTAGGGGT GCTTGATACC
CCGGGCGATC GCCAAGGTCG GTTTGACCCC AATCAGCCGA TCGATCGCGG TACTTTTGCG
CGCTGGTTGC TCGCTGTCAA CAACCGTTTC TTTGAGGACG ACCCAGGTCG CCAAATTCGG
CTGGCGATCG CCGATAGTCC GCCAATTTAC ACGGACGTTC CCACCAGCAA CCCAGACTTC
ATCGCCATTC AATCATTGGC TGAAGCGGGA ACTCTCCCCA GCCGCCTCAG TGGCGATACG
GCTGCAACCC GCTTCCAGCC TGAGGCTCCT CTGACCCGTG CTGACTTACT GCTCTGGAAA
GTCCCCCTCG ACCATCGCCA AACACTACCG ACGGCAACCC CAGAAAAGTT AGCCGCGAGC
TGGGGCTTTC AGGATACCAA CGGGCTAGAT CCACGGCTGC AGCGGGCACT GTTGGCCGAT
GACGACAATG GAACCCAAAG CATCATTCGG CGCGTTTTTG GCTTCACTCA ACTCTTCCAG
CCGCGAAAGC CAGTGACTCG AGCTGAGGCT GCCGCTGCTC TCTGGTACAT CGGTTTCCAA
GGGGAAGGAC AATCTGCGGC TCAGGTCCTG CGATCGCAGC AAGCGCCAGA ACCTGCGACG
CCGCCAGCAG CCACCAATCC GCCCACACGT CCCTCAACGA GTTCACCGCC CACGCAGCAG
CCAGCCCCTA CCCCTCAGCC TTAA
 
Protein sequence
MRHLSGYRLR PAIALGFLTI ALQACSGTPF GQSLQQSFER PENGTGTSGA PTTPPSPTNP 
APSTPAPSPP ALSSFTDLDQ IPTALRSQVE EMIELGVLDT PGDRQGRFDP NQPIDRGTFA
RWLLAVNNRF FEDDPGRQIR LAIADSPPIY TDVPTSNPDF IAIQSLAEAG TLPSRLSGDT
AATRFQPEAP LTRADLLLWK VPLDHRQTLP TATPEKLAAS WGFQDTNGLD PRLQRALLAD
DDNGTQSIIR RVFGFTQLFQ PRKPVTRAEA AAALWYIGFQ GEGQSAAQVL RSQQAPEPAT
PPAATNPPTR PSTSSPPTQQ PAPTPQP