Gene Synpcc7942_1376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1376 
Symbol 
ID3775570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1416706 
End bp1417302 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content58% 
IMG OID637799808 
Producthypothetical protein 
Protein accessionYP_400393 
Protein GI81300185 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.98949 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATGA TGCGCAAATC TGCAGTCGCG ATCGCTGGCG TGTTAGCCGC ACTGTCAGCT 
TCGACCGCTT GGGCCCAGTC CAGTATTCCA CTGCCGACCG TGCCGGCTGG CGGTGGCTCG
TCACTCAGCA CAACCCCCTT GAAACCCTTG AGCGATCGGT TTGTGGTGCG GCTCCGCTAC
ACAGGTCCTG GTCTGAGCTT GCAAAGCGCT CTACCAATTC AAGAGGTCAT GACTGTTGAC
CAAAATGTCA CGGATAGCAG GGGCCAGGTC ATCCTACCGA TCGGGACGCC AGTGCTCGGC
CGCTTTGAAA CTAATCAGCA GGGCAGTCGG TTTGTTGCAC AAGCGCTTGT CCTCAATGGA
GTCTCAGTAC CGATCTATGC CATTTCAGAG GTCATCACCG GCCCGCCTAC GGCTGATGGC
GGTCGTGTTG CCAACAATGC AGGTGTAGGC GCAGCGGCAG GACTAGTGGT TGGAGGACCC
GTGGGGTTAG TCGGGGGGGC TGCTGTCGGA GCTGCATCAG CCTTTGGGAG TGGCTTGCCG
GCGACGAGTC TTCAACCCAA TCAAGTGCTG GAAGTCTTGC TGACCAGTGC TTGGTAA
 
Protein sequence
MEMMRKSAVA IAGVLAALSA STAWAQSSIP LPTVPAGGGS SLSTTPLKPL SDRFVVRLRY 
TGPGLSLQSA LPIQEVMTVD QNVTDSRGQV ILPIGTPVLG RFETNQQGSR FVAQALVLNG
VSVPIYAISE VITGPPTADG GRVANNAGVG AAAGLVVGGP VGLVGGAAVG AASAFGSGLP
ATSLQPNQVL EVLLTSAW