Gene Synpcc7942_1320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1320 
Symbol 
ID3775513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1349340 
End bp1350296 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content57% 
IMG OID637799751 
Producthypothetical protein 
Protein accessionYP_400337 
Protein GI81300129 
COG category[S] Function unknown 
COG ID[COG5607] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.717965 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGATT CCCTCAATCT GCCCGCTGAA AGTCTGGGTC AGTGCCTGCT GCAAGGCTTG 
CAAAAACAGG TCGATCACTA TCTGCACTAT CGTCGGGCCG TGCTGAGCGA TCGCGATCCT
GAGGATCTAC ACCAGTTGCG CGTCAGTCTG CGACGGCTGC GCAGCTTATT GGAGAACTAC
GACTTTGCTC TGAGTCTTCC AAAAGCCGTA TCCCTGCGAT CGCTCTCGAC TTTAGGACGC
CGCTGCGGTC GTGTCCGTGA TCTGGATGTC CTACTGGAAG CCTTGCACGC CTTACCGAAG
CCGGAGCGAC CTCAAGAAGC ACATCAGCTT CTCCAGCTCC AACGAAAATT GAAAAAACGC
TGTGGGCAAG CTCGCCGTCA GCTTCAGCGT GAATTAAAGC GATCGCGCTA CCAACACTGC
ATCTTGGCCC TGAGAAATTG GTTGGCTAAG CCCCGCTTTC AAGCAGCTGC CCACCTCGCG
ATCGCTGACC TATTGCCCGA GTTAGTTCTG CCCAGTTATG CCTGCCTCCA TCTCCATCCG
GCTTGGTGGA TCGACAGGGT TGCCGTAGAG CGCTTGCGGC CCATCGATAA TCGACAGCTG
CACGACCTTC GCAAGACTGT GAAGCGTTTC CGCTATGGCG TAGAGGTTCT AGAATTTTCG
CCAGAACTAG ATTTTGAGCC CTTACTGCAG CGACTCAAAC CCCTGCAAAC AGCTTTAGGC
AACTGGCAAG ATCGCGCCAC TTGGACGGCG TTACTAGCCC ATCAGCAGGC GAACTGGCAG
CAACGGATTC CGAGCCTGGC CGATCGCTGG CAGCAGGATA GCCAAGTTGC ATGGCGGCAA
TGGTTGGAGC AGCAACAAAC CCTGCGTGAA CCCAGTACAG GCTTGCAGGT CACGGTCTAC
GACTGCTTGG GCTGGCGATC GCCTCAGTCG GGCCGGATCA GTGCCACCCC TTCGTGA
 
Protein sequence
MSDSLNLPAE SLGQCLLQGL QKQVDHYLHY RRAVLSDRDP EDLHQLRVSL RRLRSLLENY 
DFALSLPKAV SLRSLSTLGR RCGRVRDLDV LLEALHALPK PERPQEAHQL LQLQRKLKKR
CGQARRQLQR ELKRSRYQHC ILALRNWLAK PRFQAAAHLA IADLLPELVL PSYACLHLHP
AWWIDRVAVE RLRPIDNRQL HDLRKTVKRF RYGVEVLEFS PELDFEPLLQ RLKPLQTALG
NWQDRATWTA LLAHQQANWQ QRIPSLADRW QQDSQVAWRQ WLEQQQTLRE PSTGLQVTVY
DCLGWRSPQS GRISATPS