| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1288 |
|---|
| Symbol | |
|---|
| ID | 3773577 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | + |
|---|
| Start bp | 1311028 |
|---|
| End bp | 1311534 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637799718 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_400305 |
|---|
| Protein GI | 81300097 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.951152 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCTCA AAGATTTCTG GGCCATCATT CAAGACGTGC ACGATCGCAG TGATGGCGAT
ATGGAGGCCA AGTGCGATCG CTTGCAAACA CAGCTTGCGG GTCTGAGTGC GGAAGAGGCG
ATCGCTTTTA GTCAGCACTT TGATGCCTTG ATGGATCGAG CCTACGATTG GTCGCTTTGG
GGCGCAGCCT ATTTGCTGCA GGGTGGCTGC AGTGATGATG CATTTAGTGA CTTTCGCGCT
TCGTTGATTT CACGGGGGCA AGCAGCCTAC GAAACGGCGA TCGCCAATCC CGATGCGATC
GATATCACGG ACTTTGATGA AGAGGCTTGG TTCTTCGAGG GCTTTCAGTA TGCCGTGGCG
GATGGGGTAG AAGCCGCTGC AGGATTCAGT CCACCGCGAT TGCAACCGCA TCCCAATCAA
CCGAGCGGTG AGGAATGGCA AGAAGAGGAA CTTGAGCAGT TATTGCCTCG GCTCACAGCA
TTGATGGAAG CGGCTGATTC AGACTGA
|
|---|
| Protein sequence | MDLKDFWAII QDVHDRSDGD MEAKCDRLQT QLAGLSAEEA IAFSQHFDAL MDRAYDWSLW
GAAYLLQGGC SDDAFSDFRA SLISRGQAAY ETAIANPDAI DITDFDEEAW FFEGFQYAVA
DGVEAAAGFS PPRLQPHPNQ PSGEEWQEEE LEQLLPRLTA LMEAADSD
|
|---|
| |