Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1271 |
Symbol | |
ID | 3773560 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1295438 |
End bp | 1296175 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637799701 |
Product | hypothetical protein |
Protein accession | YP_400288 |
Protein GI | 81300080 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.926997 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.593282 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCAGCG CTTCTTCTTG CCGCCGCATC TACATTGGCA CTGAAGCCAA CCAATACTTA GCGGAGCAGA CGTTGATCTA TTCGATCCGC AAGCACCTTT CGGATCCCAG CATTGAGATC ATTCCGCTGA CCCAAACTCA GCAGCGCGTT GGTGGCACCC GTTTTGGCTT TGTGCGTTTC ACGCTACCGC AAGCAATGGG CTATCAGGGC AAAGCCCTTT ACCTCGATGC CGACCAGCTA GCCCTCACTG ATTTAGCGCC AATCTTTGAC CTTTTGCCAG ACGACAAGGC GATCGCCTGC GTCTACGAAG CAGAAGGGCT TTACAACGGC AAACCCCATG TCCAGACCTG GCATACCAGC GTCATGCTGC TGGACTGTGA GCAACTAGCC TGGCAACCAG ATGAGCTGTT TGCCACAGTG GTGCCGAACA AGCAAGAACC TAAGCCTGGT CAGATTCGCT ATCGCAACTT CATGGAGCTG CAATGGTTCG AGCAGGAGCG CATTGCCAAG CTGCCGCCTT CTTGGAATCA CTTCAACATC GTGACGCCCG AGACGAACAT TGTGCACTTT TCCCATGTCC GTAGTCAGCC TTGGAAAAAT CCTCGCCATG AGTTGACGGA TTTTTGGCTG GGTTATCTCA AGGAAGCGAT CGCAGCAGGT TATTTACGGC GACGGGATGT AGTCGCAGCA GTTGCACGGG GACATGTTCA CCCTTGGACG CTCAAAGCGA TCGCCTAG
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Protein sequence | MGSASSCRRI YIGTEANQYL AEQTLIYSIR KHLSDPSIEI IPLTQTQQRV GGTRFGFVRF TLPQAMGYQG KALYLDADQL ALTDLAPIFD LLPDDKAIAC VYEAEGLYNG KPHVQTWHTS VMLLDCEQLA WQPDELFATV VPNKQEPKPG QIRYRNFMEL QWFEQERIAK LPPSWNHFNI VTPETNIVHF SHVRSQPWKN PRHELTDFWL GYLKEAIAAG YLRRRDVVAA VARGHVHPWT LKAIA
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