Gene Synpcc7942_1270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1270 
Symbol 
ID3773559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1295129 
End bp1295425 
Gene Length297 bp 
Protein Length98 aa 
Translation table11 
GC content51% 
IMG OID637799700 
Producthypothetical protein 
Protein accessionYP_400287 
Protein GI81300079 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.516998 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.920527 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTCAA TATGTAAAGC AACTAATCAT CTGGCAGGGA TCAGACCTGA TCCTAAATCC 
AGGTTGGAGT GCAATCCTCG GATCCCCCTT ATGGCCCCTA TTGATAGCCG CGAGCTCAAC
CTCACTGACG TTTCAGAAAC CGACGTCACA CCTCTTGTGC CTAGAGAAGA GTTGAATGCC
TGGAAACGTG GTTTTACGCC ACAGGCTGAG ATCTGGAATG GCCGCTTTGC CATGCTGGGC
GTCACCCTCG TTTTGGCAAC CGTGTTGATT CTCAACTGGG AACGCCTTGG TTTCTAG
 
Protein sequence
MMSICKATNH LAGIRPDPKS RLECNPRIPL MAPIDSRELN LTDVSETDVT PLVPREELNA 
WKRGFTPQAE IWNGRFAMLG VTLVLATVLI LNWERLGF