| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1222 |
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| Symbol | truB |
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| ID | 3773510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 1242925 |
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| End bp | 1243809 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637799651 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_400239 |
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| Protein GI | 81300031 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.732593 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATCGG AAGGGTTTGT CAACCTCGAT AAGCCAGCGG GCTGGACTTC CCATGACTGT
GTCGCCAAGT TACGGCGTCT GTTACGGGAG CGGCGTATCG GCCATGGTGG CACGCTTGAT
CCGGCAGTCA CAGGTGTTCT GCCGATCGCG GTGGGACGAG CCACGCGGCT CCTACCCTAT
CTTCCCAGTG GCAAAACCTA CGTCGGCACC ATTCGCTTCG GGTTGCAGAC CAGTACGGAC
GATCTGACGG GCGATCGCCT GGCAGAAGCC GATACCAGCC ACTTGTCGCG AGAGGCAATC
GAGGCGGCGC TACCCCAATT CCTCGGCCAC ATTCAGCAGC AACCGCCCCA GGTTAGTGCC
GTACAAGTGC AAGGGCAGCG ACTCTATCAG CTTGCTCGGC GCGGGGAAGC CCCCACGGAG
CTCCCTTGGC GCACCGTAGA AATTCAGTCA ATTCGAATTC TCCAGTGGCG ATCGGGCAGT
CAAGCCGAAT TATCTGTCGA AATCCACTGT GGTGCTGGCA CTTACATCCG TTCTCTAGCG
CGAGACCTCG GAGCCGTGCT GGGGGTCGGT GGCACCCTAG CAGAGTTGCG TCGTACTGCG
AGTAGTGGCT TTGATCTGAA CCAGAGCACG CCGCTGACTG AACTGCTCGA TGGAGCAGCG
GTGCCGCTCT TGGCTTTGGA TTTGCCATTG CAGCATTTAG CCAAAGTTCA ACTGAGTGCC
GAAACCAGCG ATCGCTGGCG ACAAGGACAA GCGATGCCCG TGCCTGACAG TGTTCTTCCC
GATGCAGCTC CAGTCCGTGT CTATGATCTC AACGGCCAGT TCTTAGGAAT CGGCGCGATC
GCGGCAGGAC TGTGCAAGCC CAAAGTCGTA CTCGCGGCTC TTTGA
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| Protein sequence | MSSEGFVNLD KPAGWTSHDC VAKLRRLLRE RRIGHGGTLD PAVTGVLPIA VGRATRLLPY
LPSGKTYVGT IRFGLQTSTD DLTGDRLAEA DTSHLSREAI EAALPQFLGH IQQQPPQVSA
VQVQGQRLYQ LARRGEAPTE LPWRTVEIQS IRILQWRSGS QAELSVEIHC GAGTYIRSLA
RDLGAVLGVG GTLAELRRTA SSGFDLNQST PLTELLDGAA VPLLALDLPL QHLAKVQLSA
ETSDRWRQGQ AMPVPDSVLP DAAPVRVYDL NGQFLGIGAI AAGLCKPKVV LAAL
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