Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1187 |
Symbol | |
ID | 3775493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1216357 |
End bp | 1217532 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637799614 |
Product | hypothetical protein |
Protein accession | YP_400204 |
Protein GI | 81299996 |
COG category | [S] Function unknown |
COG ID | [COG3146] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.225085 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACTGAGC CGCTCAAATT CCAATGGTGC GATCGTCTCG GGGATCTACC CCGTGAGGAT TGGAATGCGA TCGCCCAGCC CTTGGCCACA CCGTTTTTGG AATGGGACTG GTTGCACGAT TTAGAAGCCT CAGGCAGTGT CATCGCCAAA GCCGGTTGGC AGCCCTGTCA TCTGGTCGTT TGGCGCGGCG ATCGCTTAGT GGCTGCTGCA CCGCTTTACC TCAAAGGCCA TAGCTACGGT GAATTTGTCT TTGATCAGCA ATGGGCGGAT CTCGCCGGTC GGTTAGGACT GCGCTATTAC CCCAAACTGC TGGGCATGAC GCCGCTGACA CCCGCAGTCG GTTATCGCTT TCTGATTGCA CCAGCGGAAG ATGAAGCGAC CCTGACGGGA CTGATGCTGC GGGAGATCGA TCGCTTTTGC GACAACAACC AGATCCTCAG CTGCAATTTT CTCTACGTCG ATCCCGACTG GCAGCCACTG GTGGAGGCCG CAGGCTACAG CGCTTGGCAG CATCACAATT CGGTCTGGCA GAACCGCGGC TTTCGGACGT TTGATGATTA TCTCGGCATG TTCAACGCCA ATCAACGGCG CAACATTAAA CGCGAGGTCA AGTCGATGGA ACGGGCCGGA CTGACCCTCA CCTGTCTGAG TGGCGACCAA ATTCCCCGCG ATTACTTTCC GCTGATGTAT CGCTTCTACA GCGACCACTG CGATAAGTTC GGCTGGTGGG GTAGCAAGTA TCTGACGCGA GATTTCTTCG ATCGCGCCAT GCACCATTCA CGGCATCGCC TGCTGTTTGT GGCGGCAACT CCTGAAGGTA GCGATCGCCC GATCGCCATG TCCTTCTGTG TGCACAAAGG TGATCGCCTC TACGGTCGTT ACTGGGGCTG CGATCACGAA ATTGACAACC TTCACTTCAA CGTTTGTTAT TACAAACCGA TTGAATGGGC GATCGCCAAC GGGATCCAAA GCTTTGATCC GGGGGCAGGC GGGAGTCATA AAAAACGGCG TGGCTTTCCG GCAACACCGA ACTGGAGCTT ACACCGCTGG TATCAACCCC GCTTTGGCCA AATTCTGGGC ACTTGGCTAC GGCAGGTCAA TGAACTGGAA AGCCAAGAAA TTGAAGCCAT TAATGCGGAA CTTCCCTTTA GCCGTCCTGA AGTTCCGCTG AATTAG
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Protein sequence | MTEPLKFQWC DRLGDLPRED WNAIAQPLAT PFLEWDWLHD LEASGSVIAK AGWQPCHLVV WRGDRLVAAA PLYLKGHSYG EFVFDQQWAD LAGRLGLRYY PKLLGMTPLT PAVGYRFLIA PAEDEATLTG LMLREIDRFC DNNQILSCNF LYVDPDWQPL VEAAGYSAWQ HHNSVWQNRG FRTFDDYLGM FNANQRRNIK REVKSMERAG LTLTCLSGDQ IPRDYFPLMY RFYSDHCDKF GWWGSKYLTR DFFDRAMHHS RHRLLFVAAT PEGSDRPIAM SFCVHKGDRL YGRYWGCDHE IDNLHFNVCY YKPIEWAIAN GIQSFDPGAG GSHKKRRGFP ATPNWSLHRW YQPRFGQILG TWLRQVNELE SQEIEAINAE LPFSRPEVPL N
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