Gene Synpcc7942_1187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1187 
Symbol 
ID3775493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1216357 
End bp1217532 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content55% 
IMG OID637799614 
Producthypothetical protein 
Protein accessionYP_400204 
Protein GI81299996 
COG category[S] Function unknown 
COG ID[COG3146] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.225085 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGAGC CGCTCAAATT CCAATGGTGC GATCGTCTCG GGGATCTACC CCGTGAGGAT 
TGGAATGCGA TCGCCCAGCC CTTGGCCACA CCGTTTTTGG AATGGGACTG GTTGCACGAT
TTAGAAGCCT CAGGCAGTGT CATCGCCAAA GCCGGTTGGC AGCCCTGTCA TCTGGTCGTT
TGGCGCGGCG ATCGCTTAGT GGCTGCTGCA CCGCTTTACC TCAAAGGCCA TAGCTACGGT
GAATTTGTCT TTGATCAGCA ATGGGCGGAT CTCGCCGGTC GGTTAGGACT GCGCTATTAC
CCCAAACTGC TGGGCATGAC GCCGCTGACA CCCGCAGTCG GTTATCGCTT TCTGATTGCA
CCAGCGGAAG ATGAAGCGAC CCTGACGGGA CTGATGCTGC GGGAGATCGA TCGCTTTTGC
GACAACAACC AGATCCTCAG CTGCAATTTT CTCTACGTCG ATCCCGACTG GCAGCCACTG
GTGGAGGCCG CAGGCTACAG CGCTTGGCAG CATCACAATT CGGTCTGGCA GAACCGCGGC
TTTCGGACGT TTGATGATTA TCTCGGCATG TTCAACGCCA ATCAACGGCG CAACATTAAA
CGCGAGGTCA AGTCGATGGA ACGGGCCGGA CTGACCCTCA CCTGTCTGAG TGGCGACCAA
ATTCCCCGCG ATTACTTTCC GCTGATGTAT CGCTTCTACA GCGACCACTG CGATAAGTTC
GGCTGGTGGG GTAGCAAGTA TCTGACGCGA GATTTCTTCG ATCGCGCCAT GCACCATTCA
CGGCATCGCC TGCTGTTTGT GGCGGCAACT CCTGAAGGTA GCGATCGCCC GATCGCCATG
TCCTTCTGTG TGCACAAAGG TGATCGCCTC TACGGTCGTT ACTGGGGCTG CGATCACGAA
ATTGACAACC TTCACTTCAA CGTTTGTTAT TACAAACCGA TTGAATGGGC GATCGCCAAC
GGGATCCAAA GCTTTGATCC GGGGGCAGGC GGGAGTCATA AAAAACGGCG TGGCTTTCCG
GCAACACCGA ACTGGAGCTT ACACCGCTGG TATCAACCCC GCTTTGGCCA AATTCTGGGC
ACTTGGCTAC GGCAGGTCAA TGAACTGGAA AGCCAAGAAA TTGAAGCCAT TAATGCGGAA
CTTCCCTTTA GCCGTCCTGA AGTTCCGCTG AATTAG
 
Protein sequence
MTEPLKFQWC DRLGDLPRED WNAIAQPLAT PFLEWDWLHD LEASGSVIAK AGWQPCHLVV 
WRGDRLVAAA PLYLKGHSYG EFVFDQQWAD LAGRLGLRYY PKLLGMTPLT PAVGYRFLIA
PAEDEATLTG LMLREIDRFC DNNQILSCNF LYVDPDWQPL VEAAGYSAWQ HHNSVWQNRG
FRTFDDYLGM FNANQRRNIK REVKSMERAG LTLTCLSGDQ IPRDYFPLMY RFYSDHCDKF
GWWGSKYLTR DFFDRAMHHS RHRLLFVAAT PEGSDRPIAM SFCVHKGDRL YGRYWGCDHE
IDNLHFNVCY YKPIEWAIAN GIQSFDPGAG GSHKKRRGFP ATPNWSLHRW YQPRFGQILG
TWLRQVNELE SQEIEAINAE LPFSRPEVPL N