| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1178 |
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| Symbol | |
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| ID | 3775484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 1210031 |
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| End bp | 1211080 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637799605 |
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| Product | Ycf48-like protein |
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| Protein accession | YP_400195 |
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| Protein GI | 81299987 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4447] Uncharacterized protein related to plant photosystem II stability/assembly factor |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATCGC TCCTGTCTCG ATCGCGTGTC GGCTGGCTGC TTGGTTTCTT GCTGCTGCCC
TTGTTGTTTT GGCTACCGGC GCCCGCTTGG GCGGCCACTG AGGTGGCTCC ATCAACCAGT
CCTTGGCAAG TGATTGATCT TGGCACCGAG AAAACCATCC TGGATATCGC CTTTACCAGC
AACAAACAGC ACGGCTGGCT GGTGGGCACC GATCTCGCCC TCTACGAGAC TCTGGATGGT
GGACAAAGCT GGAGCGAACG GGCCCTCGAC TTGGACGAGA CCTATCGGCT CAACTCGATC
AGCTTCAAGG GCGATGAAGG CTGGGTCGTC GGTCAGCCCT CCCTGATGCT GCACACGACC
GATGGCGGCA AAAACTGGTT GCGGATTCCC CTCAGCGAAA AACTGCCGGG TTCGCCCCTG
CTGGTTACCG CTCTCGGCAA AGGCGAAGCA GAAATGGCAA CGGATGTGGC AGCCATCTAT
CGCAGCCGCG ATGGCGGTAA GAGCTGGCAA GCCCAAGTAC CCGATGCTGC TGGCGTGGCC
CGCTCGGTCA GCCGCAGTCG TGATGGTCGC TATCTGGCAG TCTCGGCGCG GGGTAATTTC
TACTCGACTT GGAAACCCGG GGATACTACC TGGACACCGC ACCAACGTAC GTCTTCTCGT
CGTCTACAGC TCATGGGCTT TGGTCCTGAC GATCGCACCT GGCTGATTGC CCGGGGGGGA
CGCCTCCAAT TCTCCAAAAC CAGTCAGATT GATAACTGGG AAGAAATGCT GGAGGAAAGC
GATGCTTGGG GCACTGCAAT CGAGCCTGAA CGCAACGCAG GCTGGGGCTT CCTTGATTTG
GCCTACCGCT CCAAGCAGGA AATTTGGCTG TCGGGTGGCA GTGGCACCCT GTTGGTGAGC
GAGGATGGCG GGGAACACTG GCAACGCGAT CGCGTGATTG CCAAACTGCC GAGCAACCTC
TACACCATCA AGTTTTTTGC ACCCAAGCAA GGCTTTGTCC TCGGTCAACG CGGCTTACTG
CTGCGTTATG CACCAGAGGC TGCAGCCTAG
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| Protein sequence | MSSLLSRSRV GWLLGFLLLP LLFWLPAPAW AATEVAPSTS PWQVIDLGTE KTILDIAFTS
NKQHGWLVGT DLALYETLDG GQSWSERALD LDETYRLNSI SFKGDEGWVV GQPSLMLHTT
DGGKNWLRIP LSEKLPGSPL LVTALGKGEA EMATDVAAIY RSRDGGKSWQ AQVPDAAGVA
RSVSRSRDGR YLAVSARGNF YSTWKPGDTT WTPHQRTSSR RLQLMGFGPD DRTWLIARGG
RLQFSKTSQI DNWEEMLEES DAWGTAIEPE RNAGWGFLDL AYRSKQEIWL SGGSGTLLVS
EDGGEHWQRD RVIAKLPSNL YTIKFFAPKQ GFVLGQRGLL LRYAPEAAA
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