| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1136 |
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| Symbol | |
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| ID | 3775086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 1158027 |
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| End bp | 1160624 |
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| Gene Length | 2598 bp |
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| Protein Length | 865 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637799562 |
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| Product | HEAT repeat-containing PBS lyase |
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| Protein accession | YP_400153 |
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| Protein GI | 81299945 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0308] Aminopeptidase N |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.332522 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.469366 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCAGC ATCACCGCTT TTTTTCGCTT GGTTTTGATG GCGGCGATCG CCCCAGTTTT
GAATTGCCTG GTGCTAAGCC GCACTACGTG CCCGATCGCC CGGGGCAGGT GGAACATATT
GCGCTAGATC TGACGCTGGA TTTGCAACAG CAGCAGGTGG CGGGAACCTG TCAGATCCGT
CTCAAGCCCG TGCGCGATGG GATTGAACTG CTGGAACTGG ATGCGGTGCA ACAGCAGATT
GAAGCGGTCA ATATTGGCCG GCGATCGGCT CGTTTTGACT ACGACGGAGA GCAGCTGCGG
ATTCATCTGC CCAATGCCAC TAAAGTTGGG CGATCGCTAG AAATCACGAT TCACTACCGC
CTCGATCGCC CGCAGCGCGG GCTCTACTTC ATCCAGCCCG ATGAGGACTA TCCCAACAAG
CCTGTTCAGG TTTGGACGCA GGGCGAGGAT GAAGACTCAC GCTACTGGTT TCCCTGCTTC
GACTATCCGG GACAACTGGC AACCAGCGAA CTGAAGGTGA CGGTGCCCAA GCCTTACCGT
GCCATTTCTA ATGGGGAGGC GATTGCGGTC ACCGATCATG GGGGACAGCA ACAGTTCCAT
TGGCGGCAGT CGGAGCCGCA TCCCACCTAT TTGATGACCT TGGCGGTGGG TGACTTTGCA
GAACTAGAGG ATAGCTGGGA CGGTATTCCT ATCCGCTATT ACGTCGAAAA AGGCCGCGAA
GATCAGGGCC TGCGCACCAT GGGCAAAACG CCACGCATGG TCGAGTTCTT TAGCCGTACT
TTTGGCTATC GCTATCCCTT CGTCCAGTAC GCGCAAGTCT GTGTCGACGA CTTCATCTTT
GGCGGCATGG AAAACACCGC CTGCACTCTC CTGACCGATC GCTGTTTGCT GGATGAACGC
GCCGCGATCG ATAACCGCAG CTCCGAGACG CTAGTGGCTC ATGAGCTGGC GCACCAATGG
TTTGGCGATT TGCTGGTGAT TCGCCACTGG TCCCACGGCT GGATCAAAGA GGGCATGGCC
ACCTACTCGG AAAGTCTCTG GATTGACCAT GAGTACGGTG CTGAGGAAGC TGCCTACTAT
CGCCTACAAA CGCTGCGCAG CTACCTCGAC GAAGATCGCA ATCGCTACCG CCGGCCGATC
GTCACCCACG TCTACCGCGA GGCGATCGAA CTCTACGATC GCCACCTCTA CGAAAAAGGC
GCTTGCGTCT ATCACCTGCT GCGTACGGAA CTGGGTGAAG AGCTGTTCTG GGCTTCGATC
CATCGCTTTG TGCAGCAACA TGCTCATCAA ACCGTCGAGA CGGTCGACCT GTTACGCAGC
ATTGAGCAGA CCACGGGGCG AAATCTGCTG CCGCTGTTTG ACCAGTACGT CTTCCGAGGC
GGCCATCCCG ACTTCAAGGT CAGCTACAGC TGGGATGCTG ACGCCAAGCT CGCTAAGTTG
ACGGTGCAGC AGACCCAATC GAAGGACGGT AAGGATCTGT TCGACCTCAC CGTGCCGATC
GCCTTCTGTC AGTTGCGGGG GCGAGGTCGT AGCGTGGAAA CCGAGAGCCA AGTCTTCCGA
CTCCGCATCC ACGAAGCGGA GCAAACCTTC TATCTACCGC TGGCAACCAA GCCCGATTTC
ATCAGCTTTG ATGTCGGCAA TCACGCCCTC AAAACTGTCG AGCTGGACTA TCCGCTGGCC
GAACTACGAT CGCAGGTGCA GCACGATTCC GATCCGGTGG CGCGGATTCA GGCAGCAGCA
GCCCTCGCCA AAATGGGCGG TCGGGAAGCG ATCGCGGCCC TCGCTGATGC GCTCCACAAA
GATACGTTTT GGGGCGTCCG CGCTGAGATT GCCGGTCAAC TAGGCAGCAT CGGCCTAGAA
GCAGCGGAGA CGGCGCTGAT TAAAGCCGTC AAAGATAGTG ATCCTCGGGT TCGTCGGGCG
GTATTTACTG CTCTCGGACA AAGCCGCAGC CGCGATCGCT ATCGAGCTTT GAAATCAGCC
GTTGAAGCGG GAGACGCCAG CTACTACGCC GAAGCCAGTG CAATTACGGC GTTGGCTCAG
GTGGCGAGCC AACCGATCGC CGGCGATCGC AAAGATAAGG CAGTGATCAA GCTCCTCAAG
AGTGTTCTCA AAGAGCGATC GGGCTGGAAT GAAGTAGTGC GATCGGCAGC CGTAACAGCG
TTAGCTCAGT TCTCGGATTC CGCTGAAGCC CTAGAGCTGA TCGAGGCGCA AACTTTGCGG
GGTGTGCCGC AACCGCTGCG ACTCGCTGCA ATTCGGGCAC TGGGTCCTGT TTCTGCGGGT
CAAACAGACG CCGCGATCGC TCGCGTTTTA GCCACATTGC GCAGCCTTGC CCAAGAAGAT
TTCTTCCTGA CGCAAGTGGC AGTTGTGACG TCGCTAGGTC GAATGAAAAC ACCGCAGGCC
CTAAGCCTGT TGCAATCCCT TGCAGGGATG AGTCTTGATG GACGAGTCAA ACGGCTGGCG
GATGAAGCGA TCGCTCGGGT TCAGAAGCAA ATGGGGCCAG ATCAGTCCTT GAGGCAATTG
CGCGAGGAAA TGGATCAGCT ACGGCAGGAA AATCAAAAGC TGCAAAATCG TTTGTTGGCC
CTCGAATCAA AACAGTAA
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| Protein sequence | MPQHHRFFSL GFDGGDRPSF ELPGAKPHYV PDRPGQVEHI ALDLTLDLQQ QQVAGTCQIR
LKPVRDGIEL LELDAVQQQI EAVNIGRRSA RFDYDGEQLR IHLPNATKVG RSLEITIHYR
LDRPQRGLYF IQPDEDYPNK PVQVWTQGED EDSRYWFPCF DYPGQLATSE LKVTVPKPYR
AISNGEAIAV TDHGGQQQFH WRQSEPHPTY LMTLAVGDFA ELEDSWDGIP IRYYVEKGRE
DQGLRTMGKT PRMVEFFSRT FGYRYPFVQY AQVCVDDFIF GGMENTACTL LTDRCLLDER
AAIDNRSSET LVAHELAHQW FGDLLVIRHW SHGWIKEGMA TYSESLWIDH EYGAEEAAYY
RLQTLRSYLD EDRNRYRRPI VTHVYREAIE LYDRHLYEKG ACVYHLLRTE LGEELFWASI
HRFVQQHAHQ TVETVDLLRS IEQTTGRNLL PLFDQYVFRG GHPDFKVSYS WDADAKLAKL
TVQQTQSKDG KDLFDLTVPI AFCQLRGRGR SVETESQVFR LRIHEAEQTF YLPLATKPDF
ISFDVGNHAL KTVELDYPLA ELRSQVQHDS DPVARIQAAA ALAKMGGREA IAALADALHK
DTFWGVRAEI AGQLGSIGLE AAETALIKAV KDSDPRVRRA VFTALGQSRS RDRYRALKSA
VEAGDASYYA EASAITALAQ VASQPIAGDR KDKAVIKLLK SVLKERSGWN EVVRSAAVTA
LAQFSDSAEA LELIEAQTLR GVPQPLRLAA IRALGPVSAG QTDAAIARVL ATLRSLAQED
FFLTQVAVVT SLGRMKTPQA LSLLQSLAGM SLDGRVKRLA DEAIARVQKQ MGPDQSLRQL
REEMDQLRQE NQKLQNRLLA LESKQ
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