| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1133 |
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| Symbol | |
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| ID | 3775083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 1153415 |
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| End bp | 1155559 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637799559 |
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| Product | bacteriocin-processing peptidase |
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| Protein accession | YP_400150 |
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| Protein GI | 81299942 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.156219 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.573302 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAATATG CATGTATTCG GCAACAAAGT GAAGAGGACT GTGGAGCGGC CTGCATCGCA
ACAGTTGCAA AATACTATGG CCGTCACTTT GCACTCAATC GAGTACGGGA AATTGTCGGC
ACAGGTTCGC AGGGAACTTC TCTGTTAGGA CTTCGTAGGG GTGCTGAATC TTTAGGATTC
AATGCTCGTC AGGTAAGGGC TTCGTTGGAA CTCATTGATC ATTTAAAAGA AGCACCACTT
CCAGCAATCA TCCACTGGAA GGGTTATCAC TGGGTGATTT TATATGGCCA AAGGGGAAAG
CAATATATCA TTGCAGACCC AGGGCTTGGC ATACGCTACA TCAATCGACA TGAGTTATTA
ACTAGCTGGA GTAATGGCGT TATGCTGCTA CTTCAGCCAG ATAGTGAGAA ATTTTACAGT
CAAGAAAATG ATAAGAATGA TAGCTGGATT CGCATTATTC GACGGGTTTG GAACTTTAAA
ACACTCCTGA TTCAAGTTGT CATCATTAAT ATTGTGATTG GTATTTTGGC ACTATCAATG
CCACTCATGA TGCAGTTTTT AACAGATGAT GTCTTGATTA GAAAGGATAC ACATCTCCTA
TTCACAGTTG CGATCGCAGT AATTGCGATG AATTTTTTTA GGAATATTAT CAATCTAGTT
CAATCTCATC TAGTTGGATA TTTTGGCCAA AAGCTACAGC TAGATCTCAT TTTGGAGTAT
GGTCATCGAC TTCTCCATTT ACCCATGGCT TATTTTGATA ATCATCGCAG TGGAGAAGTG
ATTAGTCGAA TTGGTGATAT TCGGCGAATC AATGATCTAG TCTCAAAAAT TGTACTTGGC
CTGCCCAGCC AGTTCTTTAT TGCCTTGATA TCTCTATTCA TCATGCTTCG TTACAGCTCA
ATTTTGACAG CTGCAGCGAT TGCCGCATTT TTTGTCGTGA CTCTTTTTAA TTTAATTTTT
CTTCCTTTTT TACGACAAAA AAATAAGCAG CTAATTGCTG AATCGTCCGA GAATCAAGGC
TTCCTTGTTG AAACTTTTCG TGGAGCTGTC TTGCTGAAGA CAACTCAAGC GATCCATCAA
GCATGGGAAG AGTATCAGCA AAACTTTGGC CGACTTTCTT TTTTATCTTG GGGAGCACTC
AAGCTAGATA TTTATGCCGG AACTACAACC GATTTTCTAT CAACTATAAC TAATGTTAGT
ATTCTCTGGC TAGGCAGTAG CTTGGTCATT GATGGCACGC TAAGTATTGG CCAACTGCTA
GCCTTTAGTG GTTTTAGTGG TAACTTATTA GGCTTTTTAT CTGGAACAGT TGCACTTGCT
GACGAATTTT TAATTTCGCA GGTTGTCATT CAACGTTTAT CAGAAGTTTT AAGTTCAACC
CCAGAGGATA CTATCTCCTC TCATAAGCCT TGGATTCAAA TTCCTGATGA TACTAACATC
ATCTGCAAGA ATGTTACTTT CCACCATCCA GGTCGTGTTG ATCTACTGAG GAATTTTGAT
CTAACAATTC CAGGGGGCCT AGTCACTGCT CTAATTGGGC AATCTGGTTG TGGTAAAAGT
ACTCTTGCCA AGCTGATTTC TGGCCTCTAT CATCTTGACT CTGGAAACAT TCAATTTGGC
ATTTATAACC AACAAGACAT TGCTTTAGAT TGCTTACGTC AACAGGTTGT TTTGGTTCCT
CAAGATGCTC ATTTCTGGAG TCGTTCTATT GTCGAAAATT TCAAATTTTC TCATCCCAAT
ACATCATTTG AAAATATAGT TAAAGCTTGT CGAATCACAA TGGCAGATGA ATTTATCAAT
GAACTTCCTG ACAAATATCA AACCGTATTA GGTGAATTTG GGGCTAATTT ATCGGGGGGG
CAGAGGCAAA GGCTTGCCTT GGCAAGAGCG ATTATCAATA ATCCACCTGT CTTGATCCTT
GACGAGTCTA CTAGCGCTCT TGATCCCGTC ATGGAAAGTC AGATCCTTGA TAGCCTACTA
GCATTTAGAA GAGGTAAAAC GACAATTATT ATCAGCCACC GGCCACGAGT AATTCAACGT
TCTGATTGGA TTGCATTCCT TGAGAAGGGA GAATTAAAAG CTCAAGGACG TCCAAATGAC
CTGAAATCAC TTGTTGGTGA TCATCTTAAG TTTATTGCCC CTTAA
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| Protein sequence | MKYACIRQQS EEDCGAACIA TVAKYYGRHF ALNRVREIVG TGSQGTSLLG LRRGAESLGF
NARQVRASLE LIDHLKEAPL PAIIHWKGYH WVILYGQRGK QYIIADPGLG IRYINRHELL
TSWSNGVMLL LQPDSEKFYS QENDKNDSWI RIIRRVWNFK TLLIQVVIIN IVIGILALSM
PLMMQFLTDD VLIRKDTHLL FTVAIAVIAM NFFRNIINLV QSHLVGYFGQ KLQLDLILEY
GHRLLHLPMA YFDNHRSGEV ISRIGDIRRI NDLVSKIVLG LPSQFFIALI SLFIMLRYSS
ILTAAAIAAF FVVTLFNLIF LPFLRQKNKQ LIAESSENQG FLVETFRGAV LLKTTQAIHQ
AWEEYQQNFG RLSFLSWGAL KLDIYAGTTT DFLSTITNVS ILWLGSSLVI DGTLSIGQLL
AFSGFSGNLL GFLSGTVALA DEFLISQVVI QRLSEVLSST PEDTISSHKP WIQIPDDTNI
ICKNVTFHHP GRVDLLRNFD LTIPGGLVTA LIGQSGCGKS TLAKLISGLY HLDSGNIQFG
IYNQQDIALD CLRQQVVLVP QDAHFWSRSI VENFKFSHPN TSFENIVKAC RITMADEFIN
ELPDKYQTVL GEFGANLSGG QRQRLALARA IINNPPVLIL DESTSALDPV MESQILDSLL
AFRRGKTTII ISHRPRVIQR SDWIAFLEKG ELKAQGRPND LKSLVGDHLK FIAP
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