| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1128 |
|---|
| Symbol | |
|---|
| ID | 3775078 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | + |
|---|
| Start bp | 1147349 |
|---|
| End bp | 1148437 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637799554 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_400145 |
|---|
| Protein GI | 81299937 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2931] RTX toxins and related Ca2+-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAATC TGAAGATTAC TTCTGCTCAG CAGCTCTATG TTGCTTTTTA TGGTCGGCCA
GCAGATCCTG CAGGTCAAAA ATTTTGGGAT GTGATCGTTC AGGACAATCT CAGCACCCTT
AACTACGGGG CGATCGCTGA AGCCTTTGGT GAGTCAGTAG AGTCTTTCTT GCGATTCAGC
TCTTTGTCTG CCGCTGAGGC TGTCAATACG CTCTTCCAAA CAATTCTGAA CCGCGACGCT
GATCCCATCG GTCAAGATTT CTATGTCAAA GAGTTGGAAT CTGGCCGGCT CAGCTTAGCC
AATTTAGCGA TCGCGATTGT TGAGGGGATT GAAGAGGGCA GCCGAGATGC TCAGACTTTT
CTCAATAAAG TTCTAGTGGC TGATCTATTC ACCAGATCAC TAGATAGCCT TGAGGAAATT
GAAGCTTATG ACTTCTCTAA AAACCCAATC GCTTTGCCAA CCGTGCAAGC CTTGCTTGCT
CAAGTGACTG GTGATGATTC GAGTTTGCCC AACGCTCTTC AAGTCACTGC GATCGCTCAG
CAGGTTGTAG TGAGTTCCGG TTCCCCAGCT ACCGCGATCG CGATCAGTGA AGCACGGTCT
ATCGTCAAGG GTAATGATGA TAACCAGCTC AGTAGTAGCG AGGCTTTTAC GCTGATCGGT
ACTAACGGCA ACGATTTGCT AACTGCTGGA AATGGGGATG ACAATCTAAT TGGGGAACTC
GGCGCGGATA CATTGACTGG TGGAGCAGGG CAAGATCAGT TTCTCTACCG AGCGATCGCA
GATTCACAAC TATCAGGTTT TGATCAGATA ACCGACTTTC AAATCGGCAG CGATCGCTTG
GTTGGCCCTA ATTCTGTCAG TGCGACAGAA ATCAGTAACG TGGGTACAGT GAGCAGCCTC
GACCCAGAGT CACTCGTGGC GGTGCTGACG CCTGATCGTT TCATGGCCAA TGGTGCGGCA
ACCTTTCAAA TCGAGCAGCG AACTTTTGTG GCTTTCAATG ATGACTTAGC TGGGTTTCAA
GCTGAGCGTG ATCTCCTGAT TGAAATCACC GGTTTTCAGG GCGACCTCAC CAGTCTTGCC
ATTGTTTGA
|
|---|
| Protein sequence | MANLKITSAQ QLYVAFYGRP ADPAGQKFWD VIVQDNLSTL NYGAIAEAFG ESVESFLRFS
SLSAAEAVNT LFQTILNRDA DPIGQDFYVK ELESGRLSLA NLAIAIVEGI EEGSRDAQTF
LNKVLVADLF TRSLDSLEEI EAYDFSKNPI ALPTVQALLA QVTGDDSSLP NALQVTAIAQ
QVVVSSGSPA TAIAISEARS IVKGNDDNQL SSSEAFTLIG TNGNDLLTAG NGDDNLIGEL
GADTLTGGAG QDQFLYRAIA DSQLSGFDQI TDFQIGSDRL VGPNSVSATE ISNVGTVSSL
DPESLVAVLT PDRFMANGAA TFQIEQRTFV AFNDDLAGFQ AERDLLIEIT GFQGDLTSLA
IV
|
|---|
| |