| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1096 |
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| Symbol | |
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| ID | 3775046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 1113354 |
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| End bp | 1114724 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637799522 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_400113 |
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| Protein GI | 81299905 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0295127 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0112677 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAGCG ACTGGATCGC ACCCCGCCGA GGCCAAGCCA ACGTCACTCA AATGCACTAC
GCCCGCCAAG GCGTGATCAC CGAAGAAATG GACTTCGTGG CGCGGCGCGA AAATCTGCCA
GCCGATCTAA TTCGGGATGA AGTGGCACGG GGTCGGATGA TTATCCCCGC CAACATCAAC
CACACCAATT TGGAGCCGAT GGCGATCGGC ATTGCCTCCA AGTGCAAGGT CAACGCCAAC
ATCGGTGCTT CGCCTAACGC CTCCAACATC GATGAAGAAG TCGAGAAGCT GAAGCTCGCG
GTCAAATACG GTGCCGATAC CGTCATGGAC CTCTCGACCG GCGGCGGCAA CCTCGATGAG
ATTCGCACCG CGATCATCAA TGCTTCGCCG GTACCGATCG GCACCGTGCC GGTCTACCAA
GCCCTGGAAT CCGTTCACGG GCGCATCGAA AAACTCAGCG CCGACGACTT CTTGCATGTG
ATCGAAAAGC ACTGCGAACA GGGCGTCGAC TACCAAACCA TCCACGCCGG TCTGCTGATT
GAACACCTGC CCAAGGTCAA GAGCCGGATC ACCGGGATTG TTTCGCGGGG CGGCGGCATC
ATTGCCCAGT GGATGCTCTA CCACCACAAG CAAAACCCGC TCTATACCCA CTTTCGCGAC
ATCATCGAAA TCTTCAAGCG CTACGACTGT AGCTTCAGCT TGGGTGACTC GCTGCGGCCG
GGTTGCCTGC ACGATGCTAG CGACGATGCC CAGCTCAGCG AGCTGAAGAC TCTCGGTCAA
CTGACGCGGG TTGCTTGGGA ACACGACGTG CAAGTCATGG TCGAAGGGCC AGGCCACGTT
CCCATGGACC AGATCGAGTT CAACGTCCGC AAGCAAATGG AAGAGTGCTC AGAAGCTCCC
TTCTACGTCT TGGGTCCCCT CGTGACCGAC ATTGCACCGG GCTATGACCA CATCACCAGC
GCGATCGGGG CAGCAATGGC GGGCTGGTAT GGCACGGCAA TGCTCTGCTA CGTCACGCCC
AAAGAGCACT TGGGTCTGCC CAATGCGGAA GATGTGCGCA ATGGTTTGAT CGCCTACAAA
ATTGCGGCTC ATGCAGCAGA TATCGCTCGC CACCGTCCGG GTGCTCGCGA TCGCGATGAT
GAACTGAGTC GGGCACGCTA CGCCTTCGAC TGGAACAAGC AATTTGACTT GAGCCTCGAT
CCAGAGCGGG CGCGGGAATA CCACGACGAA ACTCTGCCAG CAGATATCTA CAAAACGGCA
GAATTCTGTT CGATGTGTGG ACCGAAGCAC TGTCCGATGC AAACCAAGAT CACCGAGGAA
GATCTAACCG AGTTGGAAAA ATTCCTCGAG AAAGATAGCG CTCTGGCGTA G
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| Protein sequence | MRSDWIAPRR GQANVTQMHY ARQGVITEEM DFVARRENLP ADLIRDEVAR GRMIIPANIN
HTNLEPMAIG IASKCKVNAN IGASPNASNI DEEVEKLKLA VKYGADTVMD LSTGGGNLDE
IRTAIINASP VPIGTVPVYQ ALESVHGRIE KLSADDFLHV IEKHCEQGVD YQTIHAGLLI
EHLPKVKSRI TGIVSRGGGI IAQWMLYHHK QNPLYTHFRD IIEIFKRYDC SFSLGDSLRP
GCLHDASDDA QLSELKTLGQ LTRVAWEHDV QVMVEGPGHV PMDQIEFNVR KQMEECSEAP
FYVLGPLVTD IAPGYDHITS AIGAAMAGWY GTAMLCYVTP KEHLGLPNAE DVRNGLIAYK
IAAHAADIAR HRPGARDRDD ELSRARYAFD WNKQFDLSLD PERAREYHDE TLPADIYKTA
EFCSMCGPKH CPMQTKITEE DLTELEKFLE KDSALA
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