| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1073 |
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| Symbol | rph |
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| ID | 3774006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 1084451 |
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| End bp | 1085167 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637799498 |
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| Product | ribonuclease PH |
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| Protein accession | YP_400090 |
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| Protein GI | 81299882 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0689] RNase PH |
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| TIGRFAM ID | [TIGR01966] ribonuclease PH |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.213098 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00425328 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTTGGA TTCGTCCCGA TGGTCGCCGC CCCGATCAGT TGCGAGCGAT CGCCTTTCAG
CGGCGCTTCA CCCAATTTCC AGCCGGCTCA GTTCTGGCTC AGTTTGGGCA GACGCAGGTG
CTCTGTACTG TGACGATTCA GGCGGGTGTG CCGCGCTGGC TGACGGGCCA AGGGCAGGGT
TGGCTGACGG CAGAATATCG CATGTTGCCC GGGGCGACCC CCGATCGCCA GTCGCGGGAA
TGGCTGAAAC TGTCGGGACG CACGCAGGAG ATTCAGCGCT TGATTGGCCG GAGTTTACGG
GCGGCGATCG ACCTGAAAAA GTTGGGTGAG CGTACCCTTC TGATTGACGC CGATGTTCTG
CAAGCGGATG CCGGAACGCG CACTACCGCG ATCAATGGCA GCTGGGTCGC ACTTCAGGAT
GCGATCGCCC AGTTGATCGC TCAAGGAGAG CTGACGGAGT CCCCGATTCA GCGATCGATT
GCAGCCGTTT CCGTGGCCTT GATTGGTGGC GAAGCGTTTC TGGATCCGGA CTATCCCGAG
GATGTCCAAG CCGACGTGGA TTGCAATGTG GTGATGGGCG ATCGCGGCGA GCTGATCGAA
ATTCAAGGTA CAGCGGAGGC CAACCCTTTC AGCCGCACGC AGCTCAATCA CATTTTGGAT
CTAGCTGAGC AGGGAATTGC CCAGATTCAA GCGGCTCAGT TAGAGGCTCT GCGCTAG
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| Protein sequence | MAWIRPDGRR PDQLRAIAFQ RRFTQFPAGS VLAQFGQTQV LCTVTIQAGV PRWLTGQGQG
WLTAEYRMLP GATPDRQSRE WLKLSGRTQE IQRLIGRSLR AAIDLKKLGE RTLLIDADVL
QADAGTRTTA INGSWVALQD AIAQLIAQGE LTESPIQRSI AAVSVALIGG EAFLDPDYPE
DVQADVDCNV VMGDRGELIE IQGTAEANPF SRTQLNHILD LAEQGIAQIQ AAQLEALR
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