| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1049 |
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| Symbol | |
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| ID | 3773979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 1061488 |
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| End bp | 1062309 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637799471 |
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| Product | phycobilisome rod linker polypeptide |
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| Protein accession | YP_400066 |
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| Protein GI | 81299858 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.383817 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAGTC TTGAAGCAGC CCGTCGTCTC GGATTCTCGG CCTATAGTGA GTCAGCTCCT
TTAGAATGGC GTGCGGGTGC ATCTTCGGAT GAAATCAACG CCATCATTCG CGCTGTCTAT
CGACAAGTGC TGGGCAATGA TTACGTCATG AGCACCGAGC GCTTGACCAG TGCCGAATCT
TTGCTGCGCG GTGGTGAAAT TTCGGTTCGT GATTTTGTTC GGGCAGTTGC TCTTTCCGAA
CTGTATCGCG AAAAATTCTT CCATAACAAT GCTCACAATC GATTCATTGA GCTGAACTTT
AAACACCTGC TGGGTCGTGC TCCCTACGAT CAAGCTGAAG TTGCTGCCCA TGCTGCGACT
TATCACAGTC ACGGCTATGA CGCAGATATC AATTCCTACA TTGATTCTGC TGAATACACC
GAAAGCTTTG GGGATAATGT CGTTCCTTAC TTCCGGGGTT TTGCAACGAT TCGGGCTCAA
AAAACGGTTG GTTTCAACCG CATTTTTCAG CTCTATCGCG GCTATGCAAC GAGCGATCGC
TCAGCCACCA GCCAGCGATC GCGGCTCGAT CAAGAAGTGG CACGCAATGC AGCGTCACCA
GTGTTGATCG GCTCGACGGG TAGTGCTCTT GTCGGCACCT GTGGCGGAAG CCGTGATCAG
CTTTTCCGCG TTCAAGTACA GCAGCAAGGC GTGACGGCTC GCACTTCGAA TCGGATTCGT
CGTAGCAACG CTACCTACTT CGTGTCCTAC GAAAAGCTGA ATGCAACTCT GCAACGGGTT
CATGCCCAAG GTGGCCGCAT CGTCAGCATC ACTCCAGCCT AG
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| Protein sequence | MTSLEAARRL GFSAYSESAP LEWRAGASSD EINAIIRAVY RQVLGNDYVM STERLTSAES
LLRGGEISVR DFVRAVALSE LYREKFFHNN AHNRFIELNF KHLLGRAPYD QAEVAAHAAT
YHSHGYDADI NSYIDSAEYT ESFGDNVVPY FRGFATIRAQ KTVGFNRIFQ LYRGYATSDR
SATSQRSRLD QEVARNAASP VLIGSTGSAL VGTCGGSRDQ LFRVQVQQQG VTARTSNRIR
RSNATYFVSY EKLNATLQRV HAQGGRIVSI TPA
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