Gene Synpcc7942_1021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1021 
Symbol 
ID3773949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1035731 
End bp1037074 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content60% 
IMG OID637799441 
ProductO-succinylbenzoic acid--CoA ligase 
Protein accessionYP_400038 
Protein GI81299830 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.325725 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACAC CCCTAGAACT ATTGACCTGC TGGGGACCCG ATTGGTTAGC CAGTGGTCAG 
GGCGATCGCC TTGGACAGTT GGCAGAGCAG CGCTGGCTGA GTCTGCAAGG ACGTCCAGCT
CAGCGGGTGT TGATCGTTCA TACAGATGCG ATCGCCTATC TTGCTGACTG GATTGCAGCC
GTCAGTGCTG GTTGGCCGGT CATCCTCGGT AACCCACATT GGCGGCGGCA GGAATGGGAG
GCGATCGCCA CGCAACTACA GCCGCAGCAG ATTTGGGGCG AGGCTCCGAT CGCGACTTCT
GTGGGCATTG CCGATCCCCT TGAGACGGGC TGGATTGGCA TTGCGACGGG AGGAAGTAGT
GGCGGGTTGC GCTTTGCGGT GCAGACTTGG GAGCGACTGA CGGCAGCTGC TTTGGCATTT
CAGCGATCGC CCCTAATTGA CGGTCAAGCG ATCGCAGGCA TCTGTAGCCT GCCTCTGCAC
CATGTCAGCG GCTTGATGGT GGCGGTGCGC AGTTTAGTGA CGGGTGGCCC GCTCTGGCTG
CTGCCTTGGT CCGAGCTGCA ATCCGCGGAA TGCTTGCCAA CCTGTTCTGA GGCTGTCCTG
TCGTTGGTAC CGACTCAGTT ACAGCGCTTG TTACCGCTGC GATCGCAGTG GCTCCAGCAG
CGATTGCTGA TTTTGCTGGG AGGCGCACCA GCTTGGCCGA CCCTGCTCCA GCAGGCGCAG
AACCTACAAC TCCCGATCGC GCCTTGCTAC GGCGCGACCG AAACGGCTGC TTTCATTAGC
GTTCTTTTCC CACAGCAGTT TTTGGCAGTT TCTCGCGGCG TCGGAAAACC GCTACCGGGC
GTCATGATCC AACTCAATGC CGATCGAACC GTAGCGATTC AATCCCCCAG TTTGGCCTTG
GGCTACTGGC AGGGGCCGGG CCAAGTAGAG CCGATCATCG ATGCCCAGGG CTTTTGGCAG
AGCGGCGATC GTGGCGAATG GTCAGCGGAT CACAGCCTGA TTTTACTGGG GCGACAGGGC
GATCGCATCC TCAGTGGTGG CGAGAAAATT TGGCCACTGG AAGTAGAAAC GGTGCTCTAC
AACAGTGGTC TGGTTCGAGA AGTCTGTGTT GTGGGTTTGG CTGATCCTGA CTGGGGGGAA
GTGGTGGCCG CAGCCTATGT GCCTCAGCAA CAAGCTGTGA CGCCGGAACA ACTCAAAGCT
GCGATCGCGC CGGAGCTTGC ACCCTACAAG CACCCTAAGC AATGGCTGAA CTGCAGCGCT
TTACCCCGCA CGAGCCAGGG CAAACTCGAT CGCACTGCCG TCCGTCAATT ATTCGCGGCT
AGACCACCGT TGCCGGCGCT GTGA
 
Protein sequence
MATPLELLTC WGPDWLASGQ GDRLGQLAEQ RWLSLQGRPA QRVLIVHTDA IAYLADWIAA 
VSAGWPVILG NPHWRRQEWE AIATQLQPQQ IWGEAPIATS VGIADPLETG WIGIATGGSS
GGLRFAVQTW ERLTAAALAF QRSPLIDGQA IAGICSLPLH HVSGLMVAVR SLVTGGPLWL
LPWSELQSAE CLPTCSEAVL SLVPTQLQRL LPLRSQWLQQ RLLILLGGAP AWPTLLQQAQ
NLQLPIAPCY GATETAAFIS VLFPQQFLAV SRGVGKPLPG VMIQLNADRT VAIQSPSLAL
GYWQGPGQVE PIIDAQGFWQ SGDRGEWSAD HSLILLGRQG DRILSGGEKI WPLEVETVLY
NSGLVREVCV VGLADPDWGE VVAAAYVPQQ QAVTPEQLKA AIAPELAPYK HPKQWLNCSA
LPRTSQGKLD RTAVRQLFAA RPPLPAL