Gene Synpcc7942_0982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0982 
Symbol 
ID3775371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp991553 
End bp992167 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content55% 
IMG OID637799401 
Producthypothetical protein 
Protein accessionYP_399999 
Protein GI81299791 
COG category[I] Lipid transport and metabolism 
COG ID[COG2867] Oligoketide cyclase/lipid transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.499344 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.101871 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTGCT CCTCGCAGAG ACCCGCGACC TCCGCTAGGC TGGAAGAGCG ATTCCGTTCA 
AGAGACGACG ACGTGAGTCC TCTGTCGCTG AGTTTTCCCG CCCTGCACCG TTCTCCGCAG
CAAGATGTGC AGATCGACGC CCACTCCCTT GGCCCTCGCC AGCGGCGGAT TCAAGTCCAA
ATTGAAGTCC CTGTTGCGAT CGCTGATCTC TGGGCGTTGT TGACGGACTA CAACCGTCTG
GCAGAGTTCA TTCCCAACCT CTCGATCAGT CAGCGATTGC CGACGAGTGA TGGTTCGATT
CGGCTGGAGC AGGTTGGCAG CCAATGTTTT CTGCGTTTTC GCTTCTGTGC GCGGGTTGTT
TTAGCCATGC AAGAGTCGCC CTACGAGTGC TTGGCATTTC AGATGATCGA GGGGGATTTT
GAACAGTTTG ACGGTAGCTG GCGGTTTCAA TCCGTAGACG CAGATCGCAC CCAGCTGACC
TATGACGTCA CACTCTCACC CAAGCTGCCC ATGCCGATCC AGCTAATTGA GACTCAACTG
GACCAGAATC TTGCTGCCAA TTTATTGGCA ATTCGGGAAG AAGCTATCCG TCGCTTTGTC
AGCGATCGCG CCTGA
 
Protein sequence
MLCSSQRPAT SARLEERFRS RDDDVSPLSL SFPALHRSPQ QDVQIDAHSL GPRQRRIQVQ 
IEVPVAIADL WALLTDYNRL AEFIPNLSIS QRLPTSDGSI RLEQVGSQCF LRFRFCARVV
LAMQESPYEC LAFQMIEGDF EQFDGSWRFQ SVDADRTQLT YDVTLSPKLP MPIQLIETQL
DQNLAANLLA IREEAIRRFV SDRA