Gene Synpcc7942_0946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0946 
Symbol 
ID3775333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp954141 
End bp955628 
Gene Length1488 bp 
Protein Length495 aa 
Translation table11 
GC content57% 
IMG OID637799364 
ProductUDP-galactopyranose mutase 
Protein accessionYP_399963 
Protein GI81299755 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1231] Monoamine oxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTTTA GCCGTCGTCG TTTTCTGCAG TCAAGTCTCG GTGCGGCAGC AACGACCGGA 
CTCGCTGGCA CGTTGGCGGC AGGAGGACAA GCCCAGACTC GCTCTACGCC AGTTAGAAAG
CGATCGGTGT TGGTGCTTGG GGCTGGCATG GCAGGCTTGA CGGCGGCGCT GTCGTTACTC
CGGCGGGGTC ACCAAGTTAC GGTCATTGAA TACCAAAACC GAATTGGCGG GCGACTACTG
TCGGTGCCGT TGAAGGGCGG TCAGTTCAGC GAGGCAGGCG GTGGGCACTT TCGAGCCAAC
ATGCCCTACG TACTCAGCTA CATCCGACAC TTCAAACTAC CCTTGCTGAC CCTCAACGAT
GGCTTGCCTC GGTATCTGTT CGACGGCAAG ACAGCGGATG CGGCAGATCT GAGTCGCTGG
CCTTGGGATT TAGCCCCGCA AGAGCGACGA GTCAGTGTCG CCTCACTTCT GAACACTTAC
TTGATTCTGA ATGGGCTCGA CACCGATACG GTGCTGGATG CCAATTGGCC CGATGCTCAA
GCCATTCAGC AACTCGATAA TCTGACGCTG TCCCAGCTCA TCCGCCAAGT CGGGGGCTCT
GAGGCTTTTA TTCAGCTACT TGATGCCCAC GGTGGGACTT TCACCAGCAG CTCACCTGCT
TTGGGCGTGA TTCCCGATTT GGCCTACCAT TTCGGTGATC AAAATTTGTT TCGTATCCAA
GGGGGTAACG ATCGGCTGCC TAAGGCAATG GCTGCCGCAA TCGGCTCGGA ACGCTTCATC
CTAGACGCTC CTGTTGTCGC GATCGATCAG CAGGCTAATC GGGCGACGGT CACGGTCAAA
GATGGACGGA CGTTTCAGGG AGACGCCATT ATCTCGACCA TTCCCTTCAC GGTTCTGCCA
GAAGTTGCAG TTCGGCCCGG CTGGTCGGCT GGGAAACGGC GCATGTTTGC CGAGATGGAA
TGGGAGCAAA CCGTCAAGGT GATTGCCCAG ACGCGATCGC CTGTTTGGTT GGCTCAGAAT
GTCCACGGCT GGCCCATGGC TGGTTCCGAT CGCCCTTGGG AACGGGTGAT CGATATTACA
GGTAACGAGG GCGGGGGCTA TGGCAATACC TTCTTCTACC TCAATGGTCG CAACAAGGAT
GCCATGCTGG CTCGGCCCAA GTCAGAGCGG GCACAGGCAA TCGTCGATCA GTTCCGCTCC
GATCTACCGG ACTTGTTTGA TGAAGTGGTG ACGCTGGCTG ATTTTGCCTG GGGGGAACAA
CCTTGGATTC GGGGCTCCTT TGGTGGGCCA CCGCTCGGCG GAGCCTGGAT GATTCGTGAG
TGGACGACGC CAGAGGGCTT AATTCACTTC GCAGGTGATT TCACAACAAT GAAGTCCGGC
TGGGTCGAAG GGGCGATCGA GTCAGGGTTA CGGGCGGCGC GGCAAATTGA TCCGGGAGCA
CAGCCTGAAG CTGATACCTT CCTGCGGCAA GAACAACGCT GCAATTGA
 
Protein sequence
MRFSRRRFLQ SSLGAAATTG LAGTLAAGGQ AQTRSTPVRK RSVLVLGAGM AGLTAALSLL 
RRGHQVTVIE YQNRIGGRLL SVPLKGGQFS EAGGGHFRAN MPYVLSYIRH FKLPLLTLND
GLPRYLFDGK TADAADLSRW PWDLAPQERR VSVASLLNTY LILNGLDTDT VLDANWPDAQ
AIQQLDNLTL SQLIRQVGGS EAFIQLLDAH GGTFTSSSPA LGVIPDLAYH FGDQNLFRIQ
GGNDRLPKAM AAAIGSERFI LDAPVVAIDQ QANRATVTVK DGRTFQGDAI ISTIPFTVLP
EVAVRPGWSA GKRRMFAEME WEQTVKVIAQ TRSPVWLAQN VHGWPMAGSD RPWERVIDIT
GNEGGGYGNT FFYLNGRNKD AMLARPKSER AQAIVDQFRS DLPDLFDEVV TLADFAWGEQ
PWIRGSFGGP PLGGAWMIRE WTTPEGLIHF AGDFTTMKSG WVEGAIESGL RAARQIDPGA
QPEADTFLRQ EQRCN