Gene Synpcc7942_0935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0935 
Symbol 
ID3775322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp942068 
End bp942838 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content58% 
IMG OID637799353 
Producthypothetical protein 
Protein accessionYP_399952 
Protein GI81299744 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.142385 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTGGC TTGCGCTTGG GCTGGCGTTA CTGATCGGCC TCAGCTTGGG ATTGCTGGGC 
GGTGGCGGTG CTGTTTTGGC TTTGCCAGTC TTGGTTTATG TGCTGGACAT TGATCCTAAA
ACCGCGATCG CGATGACTCT GGTGGTCGTG GGGAGCGCCA GTCTACTGGG AGCAATTCCC
CATGCGCGGC GCGGCAACAT CGACTGGCTC CGGACAGGGG TATTTGGCAG CTCCACGATG
GTAGGAGCCT TTGGGGGAGC TCGACTAGCA CTGTTACCTT GGGTGACGGC TCAGCTACAA
ATGGGTTTGT TTGCTGTGGC AATTTTGGCG GCGGCGAGCT TTATGCTGTG GCCTCAGTCC
CCAAAAGCTG ACGATCCGGT TTTGAGTTAT CCGCGTCCCT TTTGTCTGAG CTGCTGGACT
TGGTTAATCA GCGAAGGGAT TGGTGTGGGG GTGCTGACGG GATTAGTCGG TGTCGGGGGT
GGCTTTGCGA TCGTTCCTGC GTTAGTGCTG CTGGGAAAAG TGCCCATGCG CAAGGCGATC
GGCACCTCCT TGGTGATCAT CGGCCTGAAT GCGATTGCAG GATTAATGGG CTACTGGGGT
CGCCTTAGTC TGCCTTGGGG ACTGACGCTG ACCTTCGCAG CTTCTGCCTG CCTCGGTACC
CTCTTGGGTG GCGCAGTATC GCAGCGGCTT AGCACGCAGG GGCTACAACG CAGTTTTGCC
CTTCTTCTGC TGGCGATCGG AGGGTTTGTC TTGGCGCGAA GTGTTTTATA G
 
Protein sequence
MQWLALGLAL LIGLSLGLLG GGGAVLALPV LVYVLDIDPK TAIAMTLVVV GSASLLGAIP 
HARRGNIDWL RTGVFGSSTM VGAFGGARLA LLPWVTAQLQ MGLFAVAILA AASFMLWPQS
PKADDPVLSY PRPFCLSCWT WLISEGIGVG VLTGLVGVGG GFAIVPALVL LGKVPMRKAI
GTSLVIIGLN AIAGLMGYWG RLSLPWGLTL TFAASACLGT LLGGAVSQRL STQGLQRSFA
LLLLAIGGFV LARSVL