Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0935 |
Symbol | |
ID | 3775322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 942068 |
End bp | 942838 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637799353 |
Product | hypothetical protein |
Protein accession | YP_399952 |
Protein GI | 81299744 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.142385 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGTGGC TTGCGCTTGG GCTGGCGTTA CTGATCGGCC TCAGCTTGGG ATTGCTGGGC GGTGGCGGTG CTGTTTTGGC TTTGCCAGTC TTGGTTTATG TGCTGGACAT TGATCCTAAA ACCGCGATCG CGATGACTCT GGTGGTCGTG GGGAGCGCCA GTCTACTGGG AGCAATTCCC CATGCGCGGC GCGGCAACAT CGACTGGCTC CGGACAGGGG TATTTGGCAG CTCCACGATG GTAGGAGCCT TTGGGGGAGC TCGACTAGCA CTGTTACCTT GGGTGACGGC TCAGCTACAA ATGGGTTTGT TTGCTGTGGC AATTTTGGCG GCGGCGAGCT TTATGCTGTG GCCTCAGTCC CCAAAAGCTG ACGATCCGGT TTTGAGTTAT CCGCGTCCCT TTTGTCTGAG CTGCTGGACT TGGTTAATCA GCGAAGGGAT TGGTGTGGGG GTGCTGACGG GATTAGTCGG TGTCGGGGGT GGCTTTGCGA TCGTTCCTGC GTTAGTGCTG CTGGGAAAAG TGCCCATGCG CAAGGCGATC GGCACCTCCT TGGTGATCAT CGGCCTGAAT GCGATTGCAG GATTAATGGG CTACTGGGGT CGCCTTAGTC TGCCTTGGGG ACTGACGCTG ACCTTCGCAG CTTCTGCCTG CCTCGGTACC CTCTTGGGTG GCGCAGTATC GCAGCGGCTT AGCACGCAGG GGCTACAACG CAGTTTTGCC CTTCTTCTGC TGGCGATCGG AGGGTTTGTC TTGGCGCGAA GTGTTTTATA G
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Protein sequence | MQWLALGLAL LIGLSLGLLG GGGAVLALPV LVYVLDIDPK TAIAMTLVVV GSASLLGAIP HARRGNIDWL RTGVFGSSTM VGAFGGARLA LLPWVTAQLQ MGLFAVAILA AASFMLWPQS PKADDPVLSY PRPFCLSCWT WLISEGIGVG VLTGLVGVGG GFAIVPALVL LGKVPMRKAI GTSLVIIGLN AIAGLMGYWG RLSLPWGLTL TFAASACLGT LLGGAVSQRL STQGLQRSFA LLLLAIGGFV LARSVL
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