| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0878 |
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| Symbol | |
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| ID | 3774055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 883835 |
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| End bp | 886261 |
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| Gene Length | 2427 bp |
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| Protein Length | 808 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637799294 |
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| Product | ribonuclease |
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| Protein accession | YP_399895 |
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| Protein GI | 81299687 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00232207 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAGCGTC TGTCGGTGTC GAGCGCCAAC AGACAATCGA GCGATCGTGG GCTTTGGCCT
GATCTTCGAG ACTGCGCCAG CAGACGGGTG TTGCGTTGCT CATCGCAGCT CCTGTCGGTC
TTTCGTCTCT GCTCGCACTG CCAGACAACT AGAGCCTCAG GCATGCCCAA ACAAATCGTT
ATTGCTGAAC AGCACCGCAT CGCAGCCGTT TTTGCCGAAG ACCAGATTGA AGAATTCATT
GTTGCCAAAG GCACTCATCA GATTGGCGAC ATTTATCTCG GCGTTGTTGA GAATGTCCTG
CCCGGGATCG ATGCGGCGTT TGTCAATATC GGTGACAGCG AAAAGAATGG TTTTATTCAC
GTCACAGATT TAGGCCCTCT GCGCTTGCGG CGCAGTGCTG GTGCGATTAC TGAGCTACTG
GCTCCTCAGC AAAAAGTGCT GGTTCAGGTG ATGAAGGAGC CCACTAGTTC CAAGGGGCCC
CGCCTGACCG GCAACATCAG CCTCCCCGGG CGGTATCTGG TTTTGATGCC CTACAGCAGT
GGCGTCAGCC TGTCGCGGCG GATCATGTCG GAAAGCGAAC GCAACCGACT GCGCGCGCTG
AGTGTGCTGA TCAAACCCGC TGGTATGGGG CTGCTGGTAC GCACCGAAGC GGATGGCATC
GCTGAAGAGC TGATCATCGA AGACTTGGAG TCGCTGCAGC GCCAGTGGGA ACAGACTCTG
CAACTGGCCG ATTCCACACC AGCCCCCGCC TTGCTAACCC GAGATGATGA CTTCATCCAA
CGGGTATTAC GCGACATGTA CGACGAGGGC GTCAACCGGA TTGTGGTGGA CTCCCACACC
GGGTTGAAGC GCGTCAAACA ACACCTTAGT GCCTGGGGGG CGGGCGAGAT TGCACCGGGC
TTATTGATTG AGCAATACCG CGATCGCAGT TCGATCCTTG ATTACTTCCG AGTCAACGCT
GCCATTCGTG AGGCTCTCAA GCCTCGGGTC GACCTGCCTT CCGGCGGCTA CGTGATCATC
GAGAAGACCG AAGCGCTGAC GGTGGTCGAT GTCAACTCGG GCTCGTTTAC GCGATCGGCC
ACGGCACGGG AAACAGTGCT TTGGACTAAC TGCGAGGCGG CAGCCGAAAT TGCTCGCCAG
TTGCGGCTCC GCAATATTGC TGGCGTGATT ATCGTCGATT TCATCGATAT GGATTCTCGC
CGTGACCAGC TCCAAGTACT GGAGCATTTC ACGCGAGCCC TGCGCCATGA CAAGTCGCGT
CCCCAGATTT CTCAGCTGTC GGAACTGGGC TTGGTGGAAT TGACGCGCAA GCGCCAAGGC
CAGAATATTT ACGAACTGTT CAGCACACCT TGTACTACCT GCGGCGGGTT AGGTCATGTT
GCCCATCTAC CAGGTGAAGT GGGTGCACAA CCGATTGTCC GCACCTCCGA TCGCCCACCA
ATTACGACTC CAGTTGCAAC AACGACTCCG GTCAGTGCCA GCACTAATCT GGCTCCCAGC
AACGACAGCT ATCTCTCGCC CGCCCGCAGT GCCCTAGCCC GCGCGACGGG TGTCCCACCG
CTCCTCAATG AAACCACCCC TGCTAGCGAG CTGGAAAACA ATGGTGATAG CTACAGCGGA
CTAGGTTTAC TAGAGCGATC GCCCCAACGA CGGGGTCGGC GTCGCGGCGG TGGTCGGAAT
GCTGGCCCTA GCCTACCCAA TACCGGCATT AATCCTGAGA TCAGTGCGTC GCCTGGGTTG
GCCGAAGCGC TGGCGGCCAC CACTCGGGAT TCAGCTCCAG AGCGCGATCG CGACAGTGAA
TCGACTGGTA TGAGTCGTCG GCCGCGCCGT CAACCGCCTG AGCCACCAGT GATTGTGGCC
GTTGAACTGA CGCTCGAAGA GCAGGAACTC TACGCTTGGA TGGGGGCTTC CCCCTTGATT
CGGGCAGAAT CCCTGCCAGA GCCAAGCCAA CCCGTTTTGG TCGGGGTCTA CGCCCAAGAG
AGTGAGAAGG AACCTGCGAT CGCGGCGGCC AAGGCACTCT ACGACCAGCG ATCGCGCCAT
CGGCGGGGCG GTGGGGACAG TGGTCGCCCA ACCCTCGCTC GTGAGAATCG CGAGACGGCC
AGCGCTGAAA GCTCTGAATC CCGTTCAGAT TCCAGCAGTA CAGCTGAAAC ACCTGCTGAG
CAGCCCAGCA GCATCACAAC CGAAGGAGCA ACGAGCGCTG TTACAGCAGA AGTGATCGCT
GCATCAGAGC CGACTCCAGC GGAGCCGACT CCAGCGGAGC CGACTCCAGC GGAGCCAACT
CCAGCGGAGC CAACACCCGT GGAACCAACA CCCGCTCCAG TGGCAGTGGC TAGCGAAGCA
TCGGAAGTCA CTGCTCCAGC TAGCGAAGTC CCTGCCCCAG GGCGGCGGCG GCGGCGTTCT
TCAGCGCAAC GTGAGTCCCA AGACTAG
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| Protein sequence | MQRLSVSSAN RQSSDRGLWP DLRDCASRRV LRCSSQLLSV FRLCSHCQTT RASGMPKQIV
IAEQHRIAAV FAEDQIEEFI VAKGTHQIGD IYLGVVENVL PGIDAAFVNI GDSEKNGFIH
VTDLGPLRLR RSAGAITELL APQQKVLVQV MKEPTSSKGP RLTGNISLPG RYLVLMPYSS
GVSLSRRIMS ESERNRLRAL SVLIKPAGMG LLVRTEADGI AEELIIEDLE SLQRQWEQTL
QLADSTPAPA LLTRDDDFIQ RVLRDMYDEG VNRIVVDSHT GLKRVKQHLS AWGAGEIAPG
LLIEQYRDRS SILDYFRVNA AIREALKPRV DLPSGGYVII EKTEALTVVD VNSGSFTRSA
TARETVLWTN CEAAAEIARQ LRLRNIAGVI IVDFIDMDSR RDQLQVLEHF TRALRHDKSR
PQISQLSELG LVELTRKRQG QNIYELFSTP CTTCGGLGHV AHLPGEVGAQ PIVRTSDRPP
ITTPVATTTP VSASTNLAPS NDSYLSPARS ALARATGVPP LLNETTPASE LENNGDSYSG
LGLLERSPQR RGRRRGGGRN AGPSLPNTGI NPEISASPGL AEALAATTRD SAPERDRDSE
STGMSRRPRR QPPEPPVIVA VELTLEEQEL YAWMGASPLI RAESLPEPSQ PVLVGVYAQE
SEKEPAIAAA KALYDQRSRH RRGGGDSGRP TLARENRETA SAESSESRSD SSSTAETPAE
QPSSITTEGA TSAVTAEVIA ASEPTPAEPT PAEPTPAEPT PAEPTPVEPT PAPVAVASEA
SEVTAPASEV PAPGRRRRRS SAQRESQD
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