Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0873 |
Symbol | |
ID | 3774050 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 873108 |
End bp | 874196 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637799289 |
Product | hypothetical protein |
Protein accession | YP_399890 |
Protein GI | 81299682 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000000116337 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.00593532 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAAAAAC GTTATCAAAT ATTTATTAGC TCAACTTTTA TTGACCTCAA AGACGAGCGA CAAGCTGCAT TAAAGGCAAT TCTAGAGATC GATCATATGC CAGCAGGAAT GGAGCTATTT TCTGCAACTG ATGATTCGGC ATGGCAGCTT ATTCAAGATG TTATAGATAG TTCTGACTAC TATATTTTGA TTGTTGGTGG TCGATACGGC TCCCTAGATG AGGCAGGTCT TAGCTATACA GAAAAAGAAT ATGATTATGC ACTTTTGACC AAGAAGCCTG TAATACCGCT GCTTCACGAA AACCCAGACA ATTTACCAAG GGACAAGACA GAAACTGATA GTAATGCTTG GAAAAAATTA CAAGACTTCA GAAAAAAGGT ACAAAAAAAG CATACATGTG TTTATTGGCG AAACGCAGAT GACTTAAAGG CTAAAGTAAT TGTTGGATTG ACTTCAGCGA TCAAGCGACA TCCTGCAGTT GGGTGGGTTA GAGCTGATAA GGTTCCAACA GAAACAGCTT TAGCTGAAGT TCTCTCTCTC AAGAATAAAA TTACAGAACT AGAGAAGGAG GCAGCCTTAT TAAGAGACAA GCCTCCATCT GGAACTGAGT TTTTAGCACA GGGAAATGAC AAATATGAAA TTCACCTCTC TTTCAAATCT CGAGGAAAGT TCTCTATCTT TTCACATGAT GAGGACAAAA AGTATAATGC ATCGATAAAC CTAACCTGGA ATGCCATATT TGCAGCAGTT GCTCCATCAA TGATTAACGA AGCTTCTGCC CATACTCTTC GTCAAGCATT TACAGATTTC TTCAAACGGG AATCATTAAA GGCTTTCCAG AGTCAAAAGA GGTTTGAGAA TTATGAGTTA GTTGATTTTT CCTTTCACAA AGATGAAATT GAGACCTGTA TAGTTCAGCT TAGAGCTCTT GGACTAATAA AGGAAAACGA TCGAAAACGC AGTGTTAGCG ACACTAGCAC CTATTGGACG CTTACTCCAT ATGGTAATAC CCTTATGGTT CAGCTTCGTG CAATAAAACG TGAGCCTCTC GAGGATGAAG ACCTTGATGG AACTGCTGTC GAATCATAA
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Protein sequence | MEKRYQIFIS STFIDLKDER QAALKAILEI DHMPAGMELF SATDDSAWQL IQDVIDSSDY YILIVGGRYG SLDEAGLSYT EKEYDYALLT KKPVIPLLHE NPDNLPRDKT ETDSNAWKKL QDFRKKVQKK HTCVYWRNAD DLKAKVIVGL TSAIKRHPAV GWVRADKVPT ETALAEVLSL KNKITELEKE AALLRDKPPS GTEFLAQGND KYEIHLSFKS RGKFSIFSHD EDKKYNASIN LTWNAIFAAV APSMINEASA HTLRQAFTDF FKRESLKAFQ SQKRFENYEL VDFSFHKDEI ETCIVQLRAL GLIKENDRKR SVSDTSTYWT LTPYGNTLMV QLRAIKREPL EDEDLDGTAV ES
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