Gene Synpcc7942_0873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0873 
Symbol 
ID3774050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp873108 
End bp874196 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content39% 
IMG OID637799289 
Producthypothetical protein 
Protein accessionYP_399890 
Protein GI81299682 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000116337 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.00593532 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAAAAAC GTTATCAAAT ATTTATTAGC TCAACTTTTA TTGACCTCAA AGACGAGCGA 
CAAGCTGCAT TAAAGGCAAT TCTAGAGATC GATCATATGC CAGCAGGAAT GGAGCTATTT
TCTGCAACTG ATGATTCGGC ATGGCAGCTT ATTCAAGATG TTATAGATAG TTCTGACTAC
TATATTTTGA TTGTTGGTGG TCGATACGGC TCCCTAGATG AGGCAGGTCT TAGCTATACA
GAAAAAGAAT ATGATTATGC ACTTTTGACC AAGAAGCCTG TAATACCGCT GCTTCACGAA
AACCCAGACA ATTTACCAAG GGACAAGACA GAAACTGATA GTAATGCTTG GAAAAAATTA
CAAGACTTCA GAAAAAAGGT ACAAAAAAAG CATACATGTG TTTATTGGCG AAACGCAGAT
GACTTAAAGG CTAAAGTAAT TGTTGGATTG ACTTCAGCGA TCAAGCGACA TCCTGCAGTT
GGGTGGGTTA GAGCTGATAA GGTTCCAACA GAAACAGCTT TAGCTGAAGT TCTCTCTCTC
AAGAATAAAA TTACAGAACT AGAGAAGGAG GCAGCCTTAT TAAGAGACAA GCCTCCATCT
GGAACTGAGT TTTTAGCACA GGGAAATGAC AAATATGAAA TTCACCTCTC TTTCAAATCT
CGAGGAAAGT TCTCTATCTT TTCACATGAT GAGGACAAAA AGTATAATGC ATCGATAAAC
CTAACCTGGA ATGCCATATT TGCAGCAGTT GCTCCATCAA TGATTAACGA AGCTTCTGCC
CATACTCTTC GTCAAGCATT TACAGATTTC TTCAAACGGG AATCATTAAA GGCTTTCCAG
AGTCAAAAGA GGTTTGAGAA TTATGAGTTA GTTGATTTTT CCTTTCACAA AGATGAAATT
GAGACCTGTA TAGTTCAGCT TAGAGCTCTT GGACTAATAA AGGAAAACGA TCGAAAACGC
AGTGTTAGCG ACACTAGCAC CTATTGGACG CTTACTCCAT ATGGTAATAC CCTTATGGTT
CAGCTTCGTG CAATAAAACG TGAGCCTCTC GAGGATGAAG ACCTTGATGG AACTGCTGTC
GAATCATAA
 
Protein sequence
MEKRYQIFIS STFIDLKDER QAALKAILEI DHMPAGMELF SATDDSAWQL IQDVIDSSDY 
YILIVGGRYG SLDEAGLSYT EKEYDYALLT KKPVIPLLHE NPDNLPRDKT ETDSNAWKKL
QDFRKKVQKK HTCVYWRNAD DLKAKVIVGL TSAIKRHPAV GWVRADKVPT ETALAEVLSL
KNKITELEKE AALLRDKPPS GTEFLAQGND KYEIHLSFKS RGKFSIFSHD EDKKYNASIN
LTWNAIFAAV APSMINEASA HTLRQAFTDF FKRESLKAFQ SQKRFENYEL VDFSFHKDEI
ETCIVQLRAL GLIKENDRKR SVSDTSTYWT LTPYGNTLMV QLRAIKREPL EDEDLDGTAV
ES