| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0793 |
|---|
| Symbol | |
|---|
| ID | 3775970 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | - |
|---|
| Start bp | 788593 |
|---|
| End bp | 789261 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637799209 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_399812 |
|---|
| Protein GI | 81299604 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.596477 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACTAT TCGATCGCAT TGGCGGAGCA GAAGATCCTA GACAAGCCAT TGAGAATGCT
TTCGCAGATA TACAGAAAGC ACTAATTCAA CTCCGGCAAG CAGTGGCTAC AGCAAACGTA
GGCAAGCAGC GCCTTGAACT GCAAATAGCA GAGGTACAGT CGCAGGCTAA TATTTGGGGA
CAGCACATAC AGCGTGCTAC ACAGCATGGG CAGCAAGACT CGGTGCGACG CGCTGAGCAA
GAGATGCAAT CCTGCAACAT AACAGTGTTG AGGTTGAAGA GACAGTTAAC TCAGCAAACT
GAGCATATTG CAACACTCAA CCGCAGCTTA GTAGACGCTG AAAGGCAAGT CGCCACGGCT
AGGGCTCAGA CAAACATGTT GAAGGCGCAG GCAGATATCG CTGCTGCTCA ATCGTGCCTG
CAAGGTTCGG TGAGTCGTCT CAGCAACAAT ACTTCCATGG CTGCTTTTGA GCGCATGGAG
GAAGAAATTC TAGGCCCGCA GGCCAGTGCC GACTTAGCTG CCACTGATTG CACAAGTCAA
TTTCAAGCTC TCGTCAACGC TGATGACATA GATTGGAGTC CTGACTCTCA GTCATTAATT
CAGCGGGTTG AGATTGAAGT GATCGATTCT GAATTAGCAG TCTTGAAGCG CGAACTGGAC
TCGCTTTAG
|
|---|
| Protein sequence | MALFDRIGGA EDPRQAIENA FADIQKALIQ LRQAVATANV GKQRLELQIA EVQSQANIWG
QHIQRATQHG QQDSVRRAEQ EMQSCNITVL RLKRQLTQQT EHIATLNRSL VDAERQVATA
RAQTNMLKAQ ADIAAAQSCL QGSVSRLSNN TSMAAFERME EEILGPQASA DLAATDCTSQ
FQALVNADDI DWSPDSQSLI QRVEIEVIDS ELAVLKRELD SL
|
|---|
| |