Gene Synpcc7942_0734 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0734 
Symbol 
ID3775906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp729177 
End bp731051 
Gene Length1875 bp 
Protein Length624 aa 
Translation table11 
GC content57% 
IMG OID637799148 
Producthypothetical protein 
Protein accessionYP_399753 
Protein GI81299545 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.747813 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAGA AACGCTTTGC TACACCGTTG ACACTGCGAG CCTCATTCGT TCCTGCCACT 
CTCAACGAGG AGCAGCGAAC GGTCGAGCTG ACTTGGAGTA CTGGCGCTAA AGTCCTGCGG
AACGGCTGGG ATGGCCGCTA CTACGAGGAG CTAAGCATGG CTCCAGAGTC AGTGCGGCTC
GATCGCCTGA ACTCCGGCGC ACCGTTGCTG AACTCACATT CTGCCTACGA CCTCAGCAGC
GTATTGGGTG TGGTGGAGCG AGCGTGGATC GACGGTAATG AGGGCCGAGC CTTAGTCCGA
TTCAGCAGTC GAGCTGAAGT CGAACCGATT TTTCGAGACG TCCGAGACGG CATCGTTCGA
AACGTGAGCG TGGGTTACAT GATTCACCGC TACGAAAAAA CCGAAGGCGA GACCGGTGAG
CCGATGACCT ATCGGATTAC CGACTGGGAG CCCCATGAGC TTTCGCTTGT GGCGATCCCC
GCCGATGCTG CCGCGAGCGT CCGAGCAAAC CCCCAACAGG AGTCCCCCAT GGACGGAGAA
GAGAACACCC TCGCGCCTGA GCAGGCCACG CCGTCTGTGG CTGATCCGGC ACCCATTGAA
GAGCGCAGCG CTGGCGACAC CGCCGCAGCG ATCGCAGCCG AGCGCAAACG CGCTGCCAGC
ATTGTCGAAA TTGTCGCTCG TGGTAAGCAG CCCCAGACCT TGGCGGATCA GTTAATCCAG
TCTGGTGCAA CCCTTGACCA AGCCCGAGAA GCGGTGATTG ATGCGATCGC CAATGCAGCT
CCCATCATCG ACAACACCAT CACCGTCACC CGCGATCGTG GCGACACTAT CCGCGAAGGC
ATCGCCAACG CCCTCGAAGC CCGCACCGGC ATCAGCGACC TGAATGAAAA GGGTCGTCGG
TATCAGGGCA TGAGCCTGAT TGAGGTAGTT CGTGTCTTGC ACGAGATGCG CGGCATTGAC
ACCCAAGGCA TGACTCGGAT TGAGCTGGCC GGTCGTGCCC TGCATACCAC CAGCGACTTC
GCTTACATCC TGTTGGATAT CACCAACAAA ACTCTGGCTC GAGGCTACGA GCAAGCGCCT
CAAACCTGGG CTCCGTTTAC TCGTATCACA AGCCTGCCTG ACTTCCGCGA CAAAAACGTC
ATCACCTTCG ATGGTCGACT GCAACTTGAT CGCGTCAACG AAGCGGGCGA GTTTACGCGA
GACAGCCCGT TTGCAGAAGG GCTGGAAAAA TACCGCCTAG CAACTTACGG GAAAGTGGTC
CCTATCGGCC GACAAGTTGT TATCAACGAC GATCTCGACG CTTTAAGCCG GATGGTGCAG
TTGATTGGGC GGGCGGTTGC AGATTTTGAA AGCGAAAAAA TCTACGACAA CTTCCTGTCT
AAACCAGTAA TGGGTGACGG TATTGCCCTG TTCCACGCAA GCCACCTAAA TGTGGGCGTT
GGCGGCATCA ACGAGGCTGG TATCTCAGCA GCCCGTCAAG CACTACGCAC CCAGCAAGAC
CTGAAGGGCA ACCGCATCAA TCTGACGGCG GGTTACTTGT TGGTGCCTAG CACGTTAGAA
ACGGCGGCTG AAAAACTCTT GGCGCCGATC AATGCCAACG AAACCGCTAA CGTAAACGTG
TTCTCGCGAT CGATGAAGAT GATCGTCGAG CCGCGACTAG ATACGGCTTC ACCGCAGTTC
TACGTTCTGG CTACGCCCAG CCAAATTGAC ATGCTTGAGG CTGCCTACCT CGAAGGTCAG
CGTGGCCCCA CGATTGAAAC CCGCGAGGGC TTCGACGTAG ACGGCATGGA GGTCAAGGTT
CGCTTGGATT TCGCATGCAA AGTGATCAAC CACCGAGGCT TCTATCGGTC GAGCGGCGTT
GATCCGACCC CCTAA
 
Protein sequence
MEQKRFATPL TLRASFVPAT LNEEQRTVEL TWSTGAKVLR NGWDGRYYEE LSMAPESVRL 
DRLNSGAPLL NSHSAYDLSS VLGVVERAWI DGNEGRALVR FSSRAEVEPI FRDVRDGIVR
NVSVGYMIHR YEKTEGETGE PMTYRITDWE PHELSLVAIP ADAAASVRAN PQQESPMDGE
ENTLAPEQAT PSVADPAPIE ERSAGDTAAA IAAERKRAAS IVEIVARGKQ PQTLADQLIQ
SGATLDQARE AVIDAIANAA PIIDNTITVT RDRGDTIREG IANALEARTG ISDLNEKGRR
YQGMSLIEVV RVLHEMRGID TQGMTRIELA GRALHTTSDF AYILLDITNK TLARGYEQAP
QTWAPFTRIT SLPDFRDKNV ITFDGRLQLD RVNEAGEFTR DSPFAEGLEK YRLATYGKVV
PIGRQVVIND DLDALSRMVQ LIGRAVADFE SEKIYDNFLS KPVMGDGIAL FHASHLNVGV
GGINEAGISA ARQALRTQQD LKGNRINLTA GYLLVPSTLE TAAEKLLAPI NANETANVNV
FSRSMKMIVE PRLDTASPQF YVLATPSQID MLEAAYLEGQ RGPTIETREG FDVDGMEVKV
RLDFACKVIN HRGFYRSSGV DPTP