Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0677 |
Symbol | |
ID | 3775660 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 672082 |
End bp | 672462 |
Gene Length | 381 bp |
Protein Length | 126 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637799089 |
Product | PadR family transcriptional regulator |
Protein accession | YP_399696 |
Protein GI | 81299488 |
COG category | [K] Transcription |
COG ID | [COG1695] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.744991 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACTTTG AAGACATCTA TCGTTTTTTC CAAGATCCGC CCCCGCACTA TCTGAGTAAA GAGTTAGCAG TCTGCTATGT GTTGGCGGTG CTTCGGCACG AAGACTCCTA CGGCACTGAG CTGATCCAGC ACTTGGAAAC GCATTGGCCC AACTATCGCC TCTCGGACAC GGTGCTCTAC ACTGCACTCA AGTTCCTTGA GGATGAGCAG ATCATTTCGG GCTATTGGAA AAAAGTAGAG GGCCGAGGGC GACCCCGCCG CATGTATCAA TTGGCTCAAG CCAACGATGA TCGCTCGCGG GATCTGGCCC AACTTTGGGA GAGATATCTG AGCTCGTCGG CCGCTACCGA TCGTCAATTG ATCCCTGTCG AAGCACGCTG A
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Protein sequence | MDFEDIYRFF QDPPPHYLSK ELAVCYVLAV LRHEDSYGTE LIQHLETHWP NYRLSDTVLY TALKFLEDEQ IISGYWKKVE GRGRPRRMYQ LAQANDDRSR DLAQLWERYL SSSAATDRQL IPVEAR
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