Gene Synpcc7942_0677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0677 
Symbol 
ID3775660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp672082 
End bp672462 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content54% 
IMG OID637799089 
ProductPadR family transcriptional regulator 
Protein accessionYP_399696 
Protein GI81299488 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.744991 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTTTG AAGACATCTA TCGTTTTTTC CAAGATCCGC CCCCGCACTA TCTGAGTAAA 
GAGTTAGCAG TCTGCTATGT GTTGGCGGTG CTTCGGCACG AAGACTCCTA CGGCACTGAG
CTGATCCAGC ACTTGGAAAC GCATTGGCCC AACTATCGCC TCTCGGACAC GGTGCTCTAC
ACTGCACTCA AGTTCCTTGA GGATGAGCAG ATCATTTCGG GCTATTGGAA AAAAGTAGAG
GGCCGAGGGC GACCCCGCCG CATGTATCAA TTGGCTCAAG CCAACGATGA TCGCTCGCGG
GATCTGGCCC AACTTTGGGA GAGATATCTG AGCTCGTCGG CCGCTACCGA TCGTCAATTG
ATCCCTGTCG AAGCACGCTG A
 
Protein sequence
MDFEDIYRFF QDPPPHYLSK ELAVCYVLAV LRHEDSYGTE LIQHLETHWP NYRLSDTVLY 
TALKFLEDEQ IISGYWKKVE GRGRPRRMYQ LAQANDDRSR DLAQLWERYL SSSAATDRQL
IPVEAR