Gene Synpcc7942_0654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0654 
Symbol 
ID3775637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp649443 
End bp650009 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content59% 
IMG OID637799066 
Productphotosystem I assembly protein Ycf4 
Protein accessionYP_399673 
Protein GI81299465 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAGCC CCGTAGCGAC CGTTGAGACG GATTCTTTAC AGCAGCCAAT CTTGGGATCC 
CGCCGCCCCA GCAACTATTT TTGGGCGATC GCGGTTTCGG TCGGGGGGAC CGGATTGCTG
CTGGCGGGCC TGTCCAGCTA CCTGCAGGTC AATCTGTTGC CCTTTTCCGA GCCGACCCGA
CTGGCCTTTT TGCCCCAAGG ACTGGTGATG GGCCTTTACG GGATCGCAGC CATCCTCTTG
GCCAGCTACC TCTGGTTTGT GATCAGCCTC GATGTCGGCG GTGGCTATAA CGCCTTCGAT
CGCAAAACTC AGAAAGCCAC CATCTTTCGC TGGGGCTTCC CGGGCAAAAA TCGTCGCGTT
GAAATCACCT ATCCCCTCAG CGATATCCAA GCGGTGCGCG TGGACATTAA AGAAGGCCTG
AACCCCAAGC GGGCCCTCTA CCTCAAGGTC AAAGGTCGGG GTGACGTTCC CCTAACGCGA
GTTGGGCAGC CGCTACCGCT AACGGAACTG GAATCGCAGG GCGCTGAGCT GGCTCGTTTT
CTGGCCGTGC CTCTGGAGGG CCTCTAA
 
Protein sequence
MPSPVATVET DSLQQPILGS RRPSNYFWAI AVSVGGTGLL LAGLSSYLQV NLLPFSEPTR 
LAFLPQGLVM GLYGIAAILL ASYLWFVISL DVGGGYNAFD RKTQKATIFR WGFPGKNRRV
EITYPLSDIQ AVRVDIKEGL NPKRALYLKV KGRGDVPLTR VGQPLPLTEL ESQGAELARF
LAVPLEGL