| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0632 |
|---|
| Symbol | rplJ |
|---|
| ID | 3775615 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | - |
|---|
| Start bp | 624322 |
|---|
| End bp | 624849 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637799044 |
|---|
| Product | 50S ribosomal protein L10 |
|---|
| Protein accession | YP_399651 |
|---|
| Protein GI | 81299443 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0244] Ribosomal protein L10 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.346234 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAGAA CGCTAGCCAA TAAGCAAGAC ATCGTCACTG AGCTCAAAGG GCTTGTTGAT
GAGGCGCAAA TGGCGTTTGT CGTCGACTAC CAAGGCCTGA CGGTCGCTGA AATCACCGAT
CTCCGCAATC GTCTGGAAGC CAGCAACTCT GTCTGCAAGG TGACCAAAAA CACCTTGATG
CGTCGCGCGA TCGCTGATGC CGACGACTGG CAGCCTCTAA CCGAATTGCT CAAAGGCACT
AACGCCTTTG TGCTGGTCAA AGATGACCCG GGCAGTGCCA TTAAGGCCTA CCAAGCGTTC
CAGAAAGACA CCAAGAAGAC TGAACTTCGC GGTGGTCTAC TGGAAGGCCG TCTGCTCAGC
AGTGATGAGC TGAAAGCCAT TGGCGATCTG CCGTCCAAGG AAGTCCTGAT TGCGCAAATT
GCTGGCGCAA TCAACGGTGT AGCAACCAAG CTCGCCGTGG GCATCAAAGA AGTCCCGAAT
TCTTTGGCAC GCGGTATCAA AGCCGTTTCC GAACAAACCG ACGCGTAA
|
|---|
| Protein sequence | MGRTLANKQD IVTELKGLVD EAQMAFVVDY QGLTVAEITD LRNRLEASNS VCKVTKNTLM
RRAIADADDW QPLTELLKGT NAFVLVKDDP GSAIKAYQAF QKDTKKTELR GGLLEGRLLS
SDELKAIGDL PSKEVLIAQI AGAINGVATK LAVGIKEVPN SLARGIKAVS EQTDA
|
|---|
| |