Gene Synpcc7942_0624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0624 
Symbol 
ID3775607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp615361 
End bp616419 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content60% 
IMG OID637799036 
Productlight dependent period 
Protein accessionYP_399643 
Protein GI81299435 
COG category[C] Energy production and conversion 
COG ID[COG1142] Fe-S-cluster-containing hydrogenase components 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.167467 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGCCT CATTCCCCCT CGAAGCTCTA CAAGCGGGTC ACTGGTTCAA GCTGATCTGT 
GGCGCAAGCT ACCAGCACTT GCCAGTGATC CGTAACCTTG CTCTGACCTA TGCCCTTGCC
GGTGCCGATT GTGTCGATGT GGCGGCGGAA CCGGCTGTGG TGCGGTCAGC GCTGGCAGGA
CTCGCAGCCT ATGAACGTCT AACAGGACGC GATCGCCCCT GGCTGATGGT CAGCCTTAAC
GACGGCGAGG ATCTGCATTT CCGCCGCGCT TGGTTTGATC CCGATCGCTG CCCCACGGAT
TGCCCCAGAC CCTGCGAGCG GGTCTGTCCG ACCGATGCAA TTACTTCCAC TGGCGTGCAA
CGCGATCGCT GCTATGGCTG TGGGCGCTGT CTACCGATCT GCCCGCTCGG GCTAATTGAA
GCGCAGGCTT GGCAAGTCGA TGCTGCGGCT CTCTTGCCGG AATTACTGGA CTTAGGGATC
AACGCGATCG AGATCCATAC CCAAGTCGGG CATCAAAAAG AATTTCAGCA GCTTTGGCAG
CAACTACAAC CGTGGCTGCC CCAACTGCAG GCGATCGCGA TCAGTTGTCC GGCTCATCCC
GAGGCGATCG CCTACCTCTG GGATTTGCAA GAACTCGTGG GCAACACGGT TGAAACCGTG
ATTTGGCAGA CGGACGGCCG CCCGATGAGC GGTGATATTG GAGCCGGTAC TACCCATGCG
GCTGTGCGCT TCGCTCAAGC CATGCTGACA GAGGGGCCAC CGGGCCATGT GCAGCTAGCG
GGCGGCACCA ATGCCCACAC TGTCGCTAAG CTGCAAGAGC TAAAGCTGTT AGCACCCCAG
GTTTCTCGCT TTGTCGCGGG GATCGCCTGC GGTGGAGCAG CACGCACACC GTTAGCTGAG
TTGCTAGAGC CTTTGGCAGA ACAGCAGCGA TCCCTCGAAG CCCATCCCGA AGTTCTGCAA
GCCGCAGTGA CAACGGCGAT CGCCTTGGTG GGGCCGCTCA AACAAGCGGT GGGTGGTGCA
ACGCGATCGA TTCCGGCCTT CCTCCTACGA ACCCCCTGA
 
Protein sequence
MSASFPLEAL QAGHWFKLIC GASYQHLPVI RNLALTYALA GADCVDVAAE PAVVRSALAG 
LAAYERLTGR DRPWLMVSLN DGEDLHFRRA WFDPDRCPTD CPRPCERVCP TDAITSTGVQ
RDRCYGCGRC LPICPLGLIE AQAWQVDAAA LLPELLDLGI NAIEIHTQVG HQKEFQQLWQ
QLQPWLPQLQ AIAISCPAHP EAIAYLWDLQ ELVGNTVETV IWQTDGRPMS GDIGAGTTHA
AVRFAQAMLT EGPPGHVQLA GGTNAHTVAK LQELKLLAPQ VSRFVAGIAC GGAARTPLAE
LLEPLAEQQR SLEAHPEVLQ AAVTTAIALV GPLKQAVGGA TRSIPAFLLR TP