Gene Synpcc7942_0620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0620 
Symbol 
ID3775602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp609866 
End bp610570 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content58% 
IMG OID637799031 
Producthypothetical protein 
Protein accessionYP_399639 
Protein GI81299431 
COG category[S] Function unknown 
COG ID[COG2968] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.628729 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTGAGTC AACAACGGCC TTGGCATTGG TTGGCCCTGA CGACCGCCGC CTTGCTAGTC 
TTGCCCGGCC CTGCCGTAAC GGAACCATCG CCCCAACGAT TGATCACTGT GACTGGACAA
GGCCGCGAGT CCGTGACTGC CAAGCTGTTG GAAGTCAATC TCGGGGTGGA AGTCCAAGCT
GCAACAGCCG AAGCGGCACA AGCAGAGGTT TCCCGCCGTG CCGATAGCTT GGTCAAGCTG
TTGCGCGATC GCCGCGTCGA ACAGTTGACC ACCACGGGAA TTACGCTTAG CCCCCGCTAC
CGCTATCGCG ACAATCAACA AATCCCCGAT GGGTTTACGG CAACCTACAG CCTGCAATTT
CGTAGCCCCA GTAATGCTGC TGGTTCGGTG ATTGATGCGG CGGTTAAGTC TGGGAGCACT
CGTATCGACA GTATTCGCTT TGTTGCTACA GACCCTGAAC TCGAGACGGC TCAAGCGACG
GCCTTACGCG AGGCGGCGGC TGATGCTCGC CAGAAAGCCG ATATCGTTTT GCGATCGCTA
GGGTTGTCCG CCCAGGAGAT CCAAACGATT CAAGTCAATA GTGCTGCAGC GCCTGGACCT
GTGCCCCAGA TGCGCACTGC GGTGGCCGAT AGTGCCGCCA ATGTGCCGAT CGTTGGGGGT
GAGCAGGATG TAACGGCCTC TGTCACCCTG CAAATCCGCT ACTAG
 
Protein sequence
MLSQQRPWHW LALTTAALLV LPGPAVTEPS PQRLITVTGQ GRESVTAKLL EVNLGVEVQA 
ATAEAAQAEV SRRADSLVKL LRDRRVEQLT TTGITLSPRY RYRDNQQIPD GFTATYSLQF
RSPSNAAGSV IDAAVKSGST RIDSIRFVAT DPELETAQAT ALREAAADAR QKADIVLRSL
GLSAQEIQTI QVNSAAAPGP VPQMRTAVAD SAANVPIVGG EQDVTASVTL QIRY