Gene Synpcc7942_0589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0589 
Symbol 
ID3774830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand+ 
Start bp577911 
End bp578573 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content56% 
IMG OID637799000 
ProductFe-S-cluster oxidoreductase-like 
Protein accessionYP_399608 
Protein GI81299400 
COG category[R] General function prediction only 
COG ID[COG0727] Predicted Fe-S-cluster oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0309459 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.576133 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATTCCGG ATGGGTTGAG ACGCTGTGAC CTAGAGGTCA CCACCGCGGA GGTACAGCAG 
GATGATCACC GCTGGGCCAG CAATCACAAG CAATGCCAGC GTCGTCAGCT GAAAAATGAC 
TTCGAAATTG ATGCTGCTCA GGAAACCCAT ATCTCTCCCC GATCTCGACC GGGCCTATGT 
CGATTCGGTA ATCGATTCTA CCGAGCGGAC GCCAATGCTT TAAGCATCGT TACAAAAATC 
CACTATCAAG CGCGGGCTAG GCTGGAGGCA GACCTTCCCT CACCGGATCT CAGCGTTATG 
GCCCAGTGGC AATGTGTACG ACAGTGTGGC GCTTGCTGTC ATCTCGACCC CCGCGATCGC 
CCCGACTTGG AGCAGTACCT GCAGCCCGAG GAAATGGCGC TCTACCTGAG CATGGTGGGC 
TCCGATGGCT GGTGCATCCA CTTTGACCAC GACAGCCGCC TCTGCAGTAT TTACGACGAT 
CGCCCCCGCT TTTGCCGCGT CCAACCCGAG ACCTTTGAGT CGATGTTTGG CGTGCCTAAA 
GAAGACCTCA ACGATTTTGC GATCGCTTGC TGTGAAGAGC AGATCGAGGG CGTTTATGGT 
GATCGCAGCC TCGAGCAGAT TCGCTTTCGG CAAGCAGTCG GGCTGGTGCT AGAGGACCTT 
TGA
 
Protein sequence
MIPDGLRRCD LEVTTAEVQQ DDHRWASNHK QCQRRQLKND FEIDAAQETH ISPRSRPGLC 
RFGNRFYRAD ANALSIVTKI HYQARARLEA DLPSPDLSVM AQWQCVRQCG ACCHLDPRDR 
PDLEQYLQPE EMALYLSMVG SDGWCIHFDH DSRLCSIYDD RPRFCRVQPE TFESMFGVPK 
EDLNDFAIAC CEEQIEGVYG DRSLEQIRFR QAVGLVLEDL