| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0584 |
|---|
| Symbol | |
|---|
| ID | 3774822 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | - |
|---|
| Start bp | 565354 |
|---|
| End bp | 566079 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637798992 |
|---|
| Product | ribose-5-phosphate isomerase A |
|---|
| Protein accession | YP_399603 |
|---|
| Protein GI | 81299395 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0120] Ribose 5-phosphate isomerase |
|---|
| TIGRFAM ID | [TIGR00021] ribose 5-phosphate isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0000147194 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.00885466 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTTGTTGA ACACCCGCAA GCCTGTTATG GATCCAGTCA CCCACATGAA ACATGAAGTC
GCGAAAGCAG CCGCGAGTCG GGTGCAATCT GGCATGGTGG TCGGGCTGGG CTCGGGCTCT
ACAGCAGCCC TCATGATTCA GTACTTGGGC GATCGCGTTC GCAATGGCGA ACTCACCAAT
ATTCAGGCTG TACCCACCTC TTTTCAGTCC TCAGTATTGG CGAATGAATA CGGCATTCCG
CTGACGACCC TGAACGAAGT CGATCGCATT GATATTGCAA TTGATGGCGC GGATGAAGTT
GATCCACAAC GCAACCTGAT CAAAGGCGGT GGCGCTTGCC ATACCCGCGA GAAACTAGTG
GATGCGCGGG CTGAGCAATT CATTGTCGTC GTTGACAGCA GCAAACTGGT AGAGGCACTC
GGAACAACCT TCTTACTGCC CGTGGAAGTG CTGCCGGAAG CTTACATTCA AGTCGGCAAA
GCCTTGGAAA AATTGGGTGG CAAACCAGAA CTGCGGATGG CGGTCAAAAA AGCAGGCCCA
GTCGTGACTG ACCAAGGCAA CCTCGTTCTC GATGTGAAAT TCGATCGCAT TGACCAGCCC
GCAGAACTGG AGAAAGCGAT TAACAACATT CCAGGCGTGC TGGAAAACGG TCTGTTTGTT
GGCTTGACCG ATCTTGTACT CGTTGGTGAA GTTGACGGCG ATCGCGTTTC TGTGCGCGAG
TTCTAG
|
|---|
| Protein sequence | MLLNTRKPVM DPVTHMKHEV AKAAASRVQS GMVVGLGSGS TAALMIQYLG DRVRNGELTN
IQAVPTSFQS SVLANEYGIP LTTLNEVDRI DIAIDGADEV DPQRNLIKGG GACHTREKLV
DARAEQFIVV VDSSKLVEAL GTTFLLPVEV LPEAYIQVGK ALEKLGGKPE LRMAVKKAGP
VVTDQGNLVL DVKFDRIDQP AELEKAINNI PGVLENGLFV GLTDLVLVGE VDGDRVSVRE
F
|
|---|
| |