| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0560 |
|---|
| Symbol | |
|---|
| ID | 3774798 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | - |
|---|
| Start bp | 541275 |
|---|
| End bp | 541979 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637798968 |
|---|
| Product | ATPase |
|---|
| Protein accession | YP_399579 |
|---|
| Protein GI | 81299371 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1122] ABC-type cobalt transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.536031 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.285253 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACGGT TGCGATCGCT TAAGCCTTTG ACCCTGCAAC TGGACGGCAT TTCGTACCAT
CCTCCCGCGA GTTCACGGCC CATCTTAGAC AATATCAGCT TCGATCTGGG CTTCCCGGAG
CTAGGTTTGA TTGTTGGCCC CAGCGGTTCT GGCAAAACGA CGCTGCTAGA ACTCCTCGCC
GGTTTGATAA TTCCACAACA GGGGCGAGTC ACCTGGCGTG ATCAGGATTT GAACTATCTC
CAACTACGGC AGCTCGCTGG GCTAGTCTTT CAGTTTCCTG AGCGGCATTT CTGCGGCCAT
ACCGTGCTGG AGGAGTTGCG CCTCGGACAT CCTGAAATCA GTCGCGATCA GGTCAAATCG
GCTCTAGTTT CGGTGGGGCT GGGGGATTTA CCTTTTTCTG CTTCGCCTTA CCAACTCAGC
GGCGGTCAAC AGCGGCGGTT GGCACTCGCA GTGCAGTTGA TTCGCCAGCC CTGCATTTTG
CTGTTGGATG AACCGACAGC CGGCCTCGAT TGGTCAATGC GTCGTCAGTT GATTCAGCTG
TTTCAGGAAC TGAAGCAAAC CTGGGGGTTG CTGATCGTCA CCCATGAACC GCAGGAACTG
GCCGCGATCG CTGATCGCCA GTGGGGAATT GTCCAAGGTC GGCTGGAACC CTGGCCAGTG
CAGCCGTCAG CCCAGGCATT GGACCAGCAG ATTAGCATTT GTTAA
|
|---|
| Protein sequence | MERLRSLKPL TLQLDGISYH PPASSRPILD NISFDLGFPE LGLIVGPSGS GKTTLLELLA
GLIIPQQGRV TWRDQDLNYL QLRQLAGLVF QFPERHFCGH TVLEELRLGH PEISRDQVKS
ALVSVGLGDL PFSASPYQLS GGQQRRLALA VQLIRQPCIL LLDEPTAGLD WSMRRQLIQL
FQELKQTWGL LIVTHEPQEL AAIADRQWGI VQGRLEPWPV QPSAQALDQQ ISIC
|
|---|
| |