| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0542 |
|---|
| Symbol | |
|---|
| ID | 3774780 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | + |
|---|
| Start bp | 525360 |
|---|
| End bp | 526253 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637798950 |
|---|
| Product | lipoyl synthase |
|---|
| Protein accession | YP_399561 |
|---|
| Protein GI | 81299353 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0320] Lipoate synthase |
|---|
| TIGRFAM ID | [TIGR00510] lipoate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGTCGTCA AACCGGAATG GCTGCGAGTC AAAGCACCGC AGTGGCAACG CGTCGGTAAC
GTCAAGCAAG TCTTGGCGGA TCTGGGGCTG AATACCGTTT GCGAAGAGGC ATCCTGTCCC
AATATTGGTG AGTGTTTTAA CGCTGGGACG GCCACCTTTT TGATCATGGG TCCGGCTTGC
ACGCGGGCTT GCCCCTACTG CGATATCGAC TTCGAAAAGA AACCCAAAGC GCTCGATCCG
ACGGAGCCGC AACGACTCGC AGAAGCTGTG GGCCGACTGA ATCTCAATCA CGTCGTGATC
ACGTCAGTCA ATCGTGATGA CTTGCCGGAT GGTGGTGCTG AGCAATTCAA ACGCTGTATT
GAAGCGGTGC GATCGCGATC GCCTCAGACC ACGATTGAGG TTCTGATTCC CGATCTCTGC
GGCAACTGGG AAGCGCTGGA AATTATTTTG TCCGCAGCGC CCGAGGTGCT GAACCACAAC
ATCGAAACGG TCTCACGACT CTACCGACGC GTGCGACCCC AAGGTGACTA TCAGCGATCG
CTGGAACTAT TGCGCCGCAG TCGGGAACAA GCGCCGTGGA TCTATACCAA GTCTGGCTTG
ATGGTGGGTC TTGGTGAAAC TGCGGAAGAA GTGCAGCAGG TCCTGGTGGA TCTCCGTAGC
GTCGACTGCG ACATCGTCAC GATCGGTCAG TACCTGCAGC CGACCCAAAA ACATTTAGGC
GTCGATCGCT TTGTCACGCC GGCGGAATTT GATGCTTGGC AACAGCAAGG CAGTCAGCTC
GGCTTCCTGC AAGTCGTGGC TTCACCCCTG ACCCGCAGTT CCTATCACGC CGAAGAAGTG
CGCCGACTGA TGCAGGAATA TCCGCGTCAG CGACCGGCGA TCGCCCTGAA TTAA
|
|---|
| Protein sequence | MVVKPEWLRV KAPQWQRVGN VKQVLADLGL NTVCEEASCP NIGECFNAGT ATFLIMGPAC
TRACPYCDID FEKKPKALDP TEPQRLAEAV GRLNLNHVVI TSVNRDDLPD GGAEQFKRCI
EAVRSRSPQT TIEVLIPDLC GNWEALEIIL SAAPEVLNHN IETVSRLYRR VRPQGDYQRS
LELLRRSREQ APWIYTKSGL MVGLGETAEE VQQVLVDLRS VDCDIVTIGQ YLQPTQKHLG
VDRFVTPAEF DAWQQQGSQL GFLQVVASPL TRSSYHAEEV RRLMQEYPRQ RPAIALN
|
|---|
| |