| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0538 |
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| Symbol | |
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| ID | 3774776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 521502 |
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| End bp | 523508 |
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| Gene Length | 2007 bp |
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| Protein Length | 668 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637798946 |
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| Product | transketolase |
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| Protein accession | YP_399557 |
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| Protein GI | 81299349 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTGTTG CGGCTCAATC CCTCGACGAA CTTTGTATTA ATTCGATCCG TTTTCTTGCC
ATTGATGCGG TCGAAAAAGC AAAGTCGGGT CACCCTGGTC TGCCCATGGG GGCAGCGCCG
ATGGCCTACG TCCTTTGGGA CCGCTTCCTG CGCTTCAATC CCAAAAACCC TGCTTGGTTC
AACCGCGATC GCTTCGTCCT CTCGGCGGGC CACGGTTGCA TGCTGCAGTA CGCGCTGCTG
CACCTGAGCG GCTACGACAG CGTCAGCATT GAAGACATCA AGAACTTCCG CCAGTGGGGT
TCGCCGACTC CGGGTCACCC CGAGAACTTT GAAACCCCGG GCGTGGAAGT GACCACTGGT
CCCTTGGGTC AAGGCATTGC CAACGCGGTT GGTCTGGCGC TAGCTGAAGC CCATCTTGCG
GCTCGCTTCA ACAAACCCGA TGCCAAGCTA GTGGATCACT ACACCTATGT GATCCTGGGC
GACGGCTGCA ACATGGAGGG TATTTCCGGT GAAGCTGCTT CGCTGGCTGG TCACTGGGGC
TTGGGCAAGC TGATCGCCCT CTACGACGAC AACCACATCT CGATCGACGG CTCGACTGAC
GTTGCCTTCA CCGAAGACGT CAGCAAGCGC TTTGAAGCTT ACGGCTGGCA TGTGCTGCAC
GTTGAAAACG GCAACACCGA TTTGGCTGCG ATCGAAAAAG CGATCGCAGA TGCCAAGGCT
GTCACCGACA AGCCGACCCT GATCAAAGTC ACCACAACGA TCGGCTACGG CTCGCCCAAC
AAAGCCAACA CGGCAGGTGT TCACGGCGCA GCCTTGGGTG ATGCGGAAAT CAAGCTGACC
CGCGAAAACC TCGGCTGGGA CTACGAACCC TTTGTGGTGC CCGAAGATGC GCTGGCGCAC
TGGCGCAAAG CGATCGAGCG TGGTGCAGCC CTGGAATCAA GCTGGAATGA AACCCTGGCT
CAGTACAAAG CCAACTACCC GGCTGAAGCG GCTGAATTTG AGCGGATGCT GAGTGGCCAA
CTGCCGACTG GCTGGGCCGA TGCACTGCCG AGCTACACCC CGGCAGATAA AGCTGTGGCG
ACCCGTAAGC ACTCGGAAAT CTGTCTGAAC GCCTTGGCTC CGGTGCTGCC GGAACTGATC
GGTGGTTCGG CAGACTTGAC CCACTCCAAC CTGACGGAGT TGCACGTCTC GGGCGACTTC
CAAAAAGGCG CTTACGAAAA TCGCAACGTC CACTTTGGGG TGCGTGAGCA TGCGATGGCG
GCGATCGCCA ACGGGATTGC TCTGCACAAC AGTGGCTTGA TTCCCTACGC TGCGACCTTC
CTGGTCTTTG CAGACTACAT GCGCGGCGCA ATGCGTCTGT CGGCGCTGTC GGAAGTCGGG
GTCATCTACG TCCTCACCCA CGACTCGATC GGCTTGGGCG AAGACGGCCC GACCCACCAA
CCGGTGGAGA CAATCGCTTC GCTGCGGATC ATCCCCAACA TGCTGGTCTT CCGTCCAGCC
GACGGCAACG AAGCTAGCGG AGCCTACAAA GTGGCGGTGG AAAACCGTAA GCGTCCGTCG
GTCTTGGCCA TGTCGCGTCA AAACCTGCCC AACTTGGAAG GTTCCAGCAT CGACATCGTT
GCCAAAGGCG CTTACGTCCT TTCGGATGAT GAAGGCACGC CGGATCTGAT TCTGCTGGCG
ACCGGTAGCG AAGTCTCGCT CTGTGTTGAA GCTGCGAAAC AACTGCGGGC AGAAGGGAAG
AAAGTCCGCA TCGTCTCGAT GCCTTGCTGG GAACTGTTCG ACGAGCAGTC GGCTGAGTAC
AAAGAATCGG TACTGCCGAA AGCCGTCACG GCTCGTCTGG CCGTGGAAGC GGGTTCCTCC
TTCGGCTGGC ATCGGTACGT CGGTGATGCT GGCGCCACGA TCTCGACTGA TACCTTTGGC
GCTTCGGCTC CGGGCAACGT CATGTTCGAG AAATTTGGCT TCACCGTCGA CAACGTCGTC
GCCAAAGCGA AAGCAGTGAT CGGCTAG
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| Protein sequence | MVVAAQSLDE LCINSIRFLA IDAVEKAKSG HPGLPMGAAP MAYVLWDRFL RFNPKNPAWF
NRDRFVLSAG HGCMLQYALL HLSGYDSVSI EDIKNFRQWG SPTPGHPENF ETPGVEVTTG
PLGQGIANAV GLALAEAHLA ARFNKPDAKL VDHYTYVILG DGCNMEGISG EAASLAGHWG
LGKLIALYDD NHISIDGSTD VAFTEDVSKR FEAYGWHVLH VENGNTDLAA IEKAIADAKA
VTDKPTLIKV TTTIGYGSPN KANTAGVHGA ALGDAEIKLT RENLGWDYEP FVVPEDALAH
WRKAIERGAA LESSWNETLA QYKANYPAEA AEFERMLSGQ LPTGWADALP SYTPADKAVA
TRKHSEICLN ALAPVLPELI GGSADLTHSN LTELHVSGDF QKGAYENRNV HFGVREHAMA
AIANGIALHN SGLIPYAATF LVFADYMRGA MRLSALSEVG VIYVLTHDSI GLGEDGPTHQ
PVETIASLRI IPNMLVFRPA DGNEASGAYK VAVENRKRPS VLAMSRQNLP NLEGSSIDIV
AKGAYVLSDD EGTPDLILLA TGSEVSLCVE AAKQLRAEGK KVRIVSMPCW ELFDEQSAEY
KESVLPKAVT ARLAVEAGSS FGWHRYVGDA GATISTDTFG ASAPGNVMFE KFGFTVDNVV
AKAKAVIG
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