Gene Synpcc7942_0523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0523 
Symbol 
ID3774761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp508314 
End bp508703 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content57% 
IMG OID637798931 
Producthypothetical protein 
Protein accessionYP_399542 
Protein GI81299334 
COG category[S] Function unknown 
COG ID[COG3686] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACCG ATTTAATTTG CTTGCTGATT CTGGCCCTGT GGACCCTACC GCTGAACCAC 
ATTCCCGCCA TTGGACGGGC TAGCAAAGCC GGTCTGGATT GGGCCATGAG CAATCGCGAT
CGCCAGCCAG AAGTGCCGGA GTGGGTGGGT CGTGCCGATC GTGCCCAGCG CAATCACCTC
GATAATCTGG CGATGATTGC CAGCGTGATT TTGATTGCGC AGATCACAGG CAAAGCGGAT
GGGACAACTG CGATCGCTTC GATTGTGCTG CTGCTAGCCC GCATCGCCCA CAGCCTCACT
TACCTAGCTG GTTTACCCCT ACCGCGATCG CTCAGCTACT TTGTCTCTAT CGCAGCCCTG
CTAACCATTG TCTGGCGTCT GTTTGCCTGA
 
Protein sequence
MTTDLICLLI LALWTLPLNH IPAIGRASKA GLDWAMSNRD RQPEVPEWVG RADRAQRNHL 
DNLAMIASVI LIAQITGKAD GTTAIASIVL LLARIAHSLT YLAGLPLPRS LSYFVSIAAL
LTIVWRLFA