Gene Synpcc7942_0521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0521 
Symbol 
ID3774759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp506835 
End bp507422 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content55% 
IMG OID637798929 
Producthypothetical protein 
Protein accessionYP_399540 
Protein GI81299332 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAATG CAGAACATCT GGCATTTCTG CGGCGCGGCA CAGCGGTCTG GAGTCGCTGG 
CGATCGCAAA ATCCAACAGT CATTCCCGAT CTTCGCCAAG CGGATCTCTC CTTTGTCGAT
CTCGTCAATG TCGATCTGGA GAGAGCAGAT CTGACGGGCG CGATTTTGGT TGGTGCGGAT
CTGCGGCGAG CTTGGTTGCG GGGTGCCATT CTCCGAGAGG CAGACTGTAG CGGTGCGAAT
TTGCTCGGGG CCGATCTCCT GCGATCGGAT CTCTGTCGGG CGCAATTGGT GGGTTCGAAT
CTGCGACGGG CGATGCTCAA CGACAGCATC TTGGCCGAGG CTAACTGTCG CCAAGCTTGC
TTGCAGCAAG CGGATTTAGT GCGGGCGATT CTCTATCGCA CAGACTTTAC AGCAGCGGAT
CTACATGAGG CTGATCTCAG TCATGCCTTC ATCTACGACG TGAATTTTAC GAGTGTTGAT
CTCAGTCACA CTGATCGCCG CTGGAGTCGC CCTGGTACAG AGTTGGCTGA ACATGAGCGC
TGGGCTTGGA CCCGTACTCA TTCAAATCAT TCGGCCTTTA TCGAATAG
 
Protein sequence
MANAEHLAFL RRGTAVWSRW RSQNPTVIPD LRQADLSFVD LVNVDLERAD LTGAILVGAD 
LRRAWLRGAI LREADCSGAN LLGADLLRSD LCRAQLVGSN LRRAMLNDSI LAEANCRQAC
LQQADLVRAI LYRTDFTAAD LHEADLSHAF IYDVNFTSVD LSHTDRRWSR PGTELAEHER
WAWTRTHSNH SAFIE