| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0487 |
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| Symbol | |
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| ID | 3774725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 473510 |
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| End bp | 474172 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637798894 |
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| Product | thylakoidal processing peptidase |
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| Protein accession | YP_399506 |
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| Protein GI | 81299298 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0681] Signal peptidase I |
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| TIGRFAM ID | [TIGR02227] signal peptidase I, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0584817 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTAAAC CAGAAACGTC GTCTACTTCC ACGGCTAGCT CTGACACCCC TAGCCCGAAG
AAGGAGAACG TCTGGCTCGA GAATGCCAAA ACCCTCGGAC TGAGCATCAT TTTTGCCCTA
GGGATTCGGC AGTTCGTCGC CGAGGCTCGC TACATTCCCT CGGGTTCGAT GCTGCCTACC
CTGCAGATCA ACGATCGCCT GATCATTGAC AAGGTTAGCT ATCGCTTCAA TCCGCCGCAG
CGGGGCGACA TCATTGTCTT TGAACCGCCC TTTGCTTTGC GGAAACGGGG CTACGACGAT
GCTTTTATCA AACGGGTGAT TGGCCTCCCC GGCGACACTG TCGAAGTCCG AGATGGCCAA
GTTTATGTCA ATGGCAAAGT CCTGAATGAG AATTACATCG CCCAAGAGCC CAGCTACACC
TGGGGACCCA AAACCGTGCC TGCCAATAGC TACCTTGTGT TGGGCGACAA CCGCAACAAC
AGCTACGACA GCCACTATTG GGGATTTGTC CCGGAAAACA AAATCATCGG TAAAGCCCTC
GTGCGTTTTT GGCCGCTCAA CCGCTTGGGG GAAGTAGAAC CTCTGCCCAG CTACCAAAAA
ACGCCACCCA TCACGCCCCT AGGCTGGCGG TTGCCACACC CGACCCACCA GCGTTTGTCC
TAG
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| Protein sequence | MAKPETSSTS TASSDTPSPK KENVWLENAK TLGLSIIFAL GIRQFVAEAR YIPSGSMLPT
LQINDRLIID KVSYRFNPPQ RGDIIVFEPP FALRKRGYDD AFIKRVIGLP GDTVEVRDGQ
VYVNGKVLNE NYIAQEPSYT WGPKTVPANS YLVLGDNRNN SYDSHYWGFV PENKIIGKAL
VRFWPLNRLG EVEPLPSYQK TPPITPLGWR LPHPTHQRLS
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