Gene Synpcc7942_0444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0444 
Symbol 
ID3773389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp434357 
End bp435040 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content59% 
IMG OID637798850 
Producthypothetical protein 
Protein accessionYP_399463 
Protein GI81299255 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.636334 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTCG CACGGACTTG TGGACTCGCC CTCGCTGCTT GTTTGGCCGG CGGCGCCGTA 
CTCGAAGCGC AGCCCGCTGC AGCAGGGCCC GATAGATGGG ATCGCTGTGA ACGCCCCGGT
CGAGGGAATC GTCGCGCCTG CTTGGAGCAG TTGAATCGCT TCAACCGGTT TGATCAGTTT
GATCGCCGAG GGGTGCCCAT TCCCGTTGTC GATCGGCGTT TTCTGCGATC GGGTAGCCGC
ATGAACCTGT TCTTCCCCGG TCGCGATCGC ATTATTTTGC GCCGCGGAGA AGTCTTGCCT
CTGGAGGGCC GCTTGGCCCG CGACATTTTT GACAATCGGG GTCGCGTTCT CGTGCCCCGC
AATAGCCGGA TTCTGGGTCA GCTGCGACCC GATGGACGGG GCCTGCGTTT CGTCAGCGAT
CGCTTGATCT TGCCGAATGG CGGCGTCTAT CCGATTCGTG CTCACTCTGG CCTGATTTTC
AGTGAGCCTT CCTTCGGTCG TCCCGACCTG AGCACAGTCT TGATCACCGG CGCTGCTCGC
ACCCTGCTGA GCAATTTGCC CGGCTACAAC GGCGCCATCG ATCGCAGTTT TGACGACGTC
TTGCAGCGCG ATAACTCCCA AATCATCGTC TTGGATTCCA GCGATCTCGG CTTAGAACTG
CTATCTGATC TGACCTTCCG TTAA
 
Protein sequence
MNFARTCGLA LAACLAGGAV LEAQPAAAGP DRWDRCERPG RGNRRACLEQ LNRFNRFDQF 
DRRGVPIPVV DRRFLRSGSR MNLFFPGRDR IILRRGEVLP LEGRLARDIF DNRGRVLVPR
NSRILGQLRP DGRGLRFVSD RLILPNGGVY PIRAHSGLIF SEPSFGRPDL STVLITGAAR
TLLSNLPGYN GAIDRSFDDV LQRDNSQIIV LDSSDLGLEL LSDLTFR