Gene Synpcc7942_0415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0415 
Symbol 
ID3773360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp405168 
End bp406145 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content58% 
IMG OID637798821 
Producthypothetical protein 
Protein accessionYP_399434 
Protein GI81299226 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCA AGACGACCGC ACCAACGGGT GCCAGTTTGT CCTGGCAGGT GACAGCCCCA 
CCTGCTGTTG ATTTAGTCGT ATCCCTGCCC CAGCCCTCGC TTGACTGTTT GTCGGGCACA
GTCACCCTCG CGATTCGGGG TGGACGACTT CCACAAGTGC AGCCGAAATC ACTCGCACTA
CTCGTAGATG GCCCGCACGA TCTGAAGTGG GAGCAAACGC CTACAGGTTG GGTGGGTTGG
CGAGAACGAC CGGGTCTTAC TCAGTTGCGC TGGCGGCTAC CGGCTCACAC TCAGCCCTAT
CCGGTCAACT GGGTCGTCAC CTTAGCGGAC TTAGTGCTTG TTCAAACTTG GGGACTGTGG
AACCACGATC TCTCGCCCAA TGCCCAGGTT TTGGCGGAGC GCTTGATTCT TAAACATTGG
CTGCGATCGC TTCCATCCAC GCCAGACGGG GCCATTTTGG CTTCAACCAC AGAACCCACG
GAGCGAACAC TGGATTGGGA TCAGTCTTTA GCCGCACTCT TGCCAACGGT TTTGGCAGGC
TATGACGGCT GGCAGTCTTT GGGCCTTGAT CCTCAACAGG ATTTCGTGGG CGCGAATCTC
ACCAGTGTGG ATTGGCGCGG CAGTGATTGG AGTGGTTGTG ACCTACGACG CACCAACTGG
CGCGGGGCCA ACCTGAATGA TGTTGATTTC TCCGGGGCAG ATCTACGCCA TAGCCGTTGG
GCTGGAGCCG ATCTTTCGGG AGCATTGCTC AGTGATGCGC GCTTACGTGG GGCAGATTTC
CGGCGGGCAA GCCTCGCGCT GGTCAATCTG GCAGGAGCGG ATCTCTCCCA AGCGGATCTG
CGGGAAGCCA ATCTGAGCCG TGCTAATTTC ACCGGCGCGA ATGTAGTGGG GGCTCGTTTT
GGCGGCAATG TCGGCTTGGA TGAAGCACAG ATTATGACTC TGCGCGATCG CGGGGCGCTA
TTCGTCGTTG AGAGCTGA
 
Protein sequence
MATKTTAPTG ASLSWQVTAP PAVDLVVSLP QPSLDCLSGT VTLAIRGGRL PQVQPKSLAL 
LVDGPHDLKW EQTPTGWVGW RERPGLTQLR WRLPAHTQPY PVNWVVTLAD LVLVQTWGLW
NHDLSPNAQV LAERLILKHW LRSLPSTPDG AILASTTEPT ERTLDWDQSL AALLPTVLAG
YDGWQSLGLD PQQDFVGANL TSVDWRGSDW SGCDLRRTNW RGANLNDVDF SGADLRHSRW
AGADLSGALL SDARLRGADF RRASLALVNL AGADLSQADL REANLSRANF TGANVVGARF
GGNVGLDEAQ IMTLRDRGAL FVVES